Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.83□□□□□ -1.48
LIMK2P53671 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.83□□□□□ -1.48
LIMK2P53671 COX6CP7-201ENST00000597056 208 ntBASIC5.83□□□□□ -1.48
LIMK2P53671 AC145423.1-201ENST00000605712 336 ntBASIC5.83□□□□□ -1.48
LIMK2P53671 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC5.83□□□□□ -1.48
LIMK2P53671 AC015712.7-201ENST00000615211 635 ntBASIC5.83□□□□□ -1.48
LIMK2P53671 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.83□□□□□ -1.48
LIMK2P53671 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
LIMK2P53671 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
LIMK2P53671 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LIMK2P53671 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LIMK2P53671 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.83□□□□□ -1.48
LIMK2P53671 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.83□□□□□ -1.48
LIMK2P53671 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
LIMK2P53671 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
LIMK2P53671 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LIMK2P53671 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LIMK2P53671 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.82□□□□□ -1.48
LIMK2P53671 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LIMK2P53671 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LIMK2P53671 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
LIMK2P53671 AC027088.4-201ENST00000611559 1947 ntBASIC5.82□□□□□ -1.48
LIMK2P53671 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
LIMK2P53671 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
LIMK2P53671 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.82□□□□□ -1.48
LIMK2P53671 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LIMK2P53671 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LIMK2P53671 MIR323A-201ENST00000362199 86 ntBASIC5.82□□□□□ -1.48
LIMK2P53671 RNA5SP453-201ENST00000362503 119 ntBASIC5.82□□□□□ -1.48
LIMK2P53671 RANP7-201ENST00000418085 644 ntBASIC5.82□□□□□ -1.48
LIMK2P53671 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.82□□□□□ -1.48
LIMK2P53671 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.82□□□□□ -1.48
LIMK2P53671 VN1R21P-201ENST00000426703 765 ntBASIC5.82□□□□□ -1.48
LIMK2P53671 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.82□□□□□ -1.48
LIMK2P53671 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LIMK2P53671 AC099670.2-201ENST00000435130 321 ntBASIC5.82□□□□□ -1.48
LIMK2P53671 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.82□□□□□ -1.48
LIMK2P53671 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.82□□□□□ -1.48
LIMK2P53671 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.82□□□□□ -1.48
LIMK2P53671 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.82□□□□□ -1.48
LIMK2P53671 UBFD1P1-201ENST00000473259 814 ntBASIC5.82□□□□□ -1.48
LIMK2P53671 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.82□□□□□ -1.48
LIMK2P53671 OR7E157P-201ENST00000494376 911 ntBASIC5.82□□□□□ -1.48
LIMK2P53671 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.82□□□□□ -1.48
LIMK2P53671 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LIMK2P53671 AC105384.2-201ENST00000508433 640 ntBASIC5.82□□□□□ -1.48
LIMK2P53671 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.82□□□□□ -1.48
LIMK2P53671 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.82□□□□□ -1.48
LIMK2P53671 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.82□□□□□ -1.48
LIMK2P53671 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.82□□□□□ -1.48
LIMK2P53671 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.82□□□□□ -1.48
LIMK2P53671 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.82□□□□□ -1.48
LIMK2P53671 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.82□□□□□ -1.48
LIMK2P53671 MIR4776-2-201ENST00000580204 80 ntBASIC5.82□□□□□ -1.48
LIMK2P53671 HIRAP1-201ENST00000605318 787 ntBASIC5.82□□□□□ -1.48
LIMK2P53671 NANOGP3-201ENST00000605855 286 ntBASIC5.82□□□□□ -1.48
LIMK2P53671 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.82□□□□□ -1.48
LIMK2P53671 MIR6768-201ENST00000610734 72 ntBASIC5.82□□□□□ -1.48
LIMK2P53671 AL031658.2-201ENST00000616850 651 ntBASIC5.82□□□□□ -1.48
LIMK2P53671 AC140134.1-201ENST00000511830 3544 ntBASIC5.82□□□□□ -1.48
LIMK2P53671 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LIMK2P53671 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LIMK2P53671 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.82□□□□□ -1.48
LIMK2P53671 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
LIMK2P53671 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LIMK2P53671 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
LIMK2P53671 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
LIMK2P53671 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LIMK2P53671 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.81□□□□□ -1.48
LIMK2P53671 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.81□□□□□ -1.48
LIMK2P53671 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.81□□□□□ -1.48
LIMK2P53671 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LIMK2P53671 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
LIMK2P53671 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
LIMK2P53671 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
LIMK2P53671 RPS3AP2-201ENST00000407190 754 ntBASIC5.81□□□□□ -1.48
LIMK2P53671 AL354890.1-201ENST00000413730 346 ntBASIC5.81□□□□□ -1.48
LIMK2P53671 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.81□□□□□ -1.48
LIMK2P53671 AL158827.1-201ENST00000416300 391 ntBASIC5.81□□□□□ -1.48
LIMK2P53671 RNGTTP1-201ENST00000420965 728 ntBASIC5.81□□□□□ -1.48
LIMK2P53671 AL355994.1-201ENST00000424379 260 ntBASIC5.81□□□□□ -1.48
LIMK2P53671 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.81□□□□□ -1.48
LIMK2P53671 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.81□□□□□ -1.48
LIMK2P53671 AL512637.1-201ENST00000439523 1231 ntBASIC5.81□□□□□ -1.48
LIMK2P53671 HMGN1P36-201ENST00000446623 298 ntBASIC5.81□□□□□ -1.48
LIMK2P53671 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.81□□□□□ -1.48
LIMK2P53671 AC090589.1-201ENST00000473109 362 ntBASIC5.81□□□□□ -1.48
LIMK2P53671 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.81□□□□□ -1.48
LIMK2P53671 GLUD1P3-202ENST00000508551 200 ntBASIC5.81□□□□□ -1.48
LIMK2P53671 PCNAP4-201ENST00000532690 730 ntBASIC5.81□□□□□ -1.48
LIMK2P53671 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.81□□□□□ -1.48
LIMK2P53671 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
LIMK2P53671 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.81□□□□□ -1.48
LIMK2P53671 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.81□□□□□ -1.48
LIMK2P53671 AC084824.2-201ENST00000548906 345 ntBASIC5.81□□□□□ -1.48
LIMK2P53671 AC135626.1-201ENST00000556983 435 ntBASIC5.81□□□□□ -1.48
LIMK2P53671 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.81□□□□□ -1.48
LIMK2P53671 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.81□□□□□ -1.48
LIMK2P53671 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.81□□□□□ -1.48
LIMK2P53671 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms