Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
MSH6P52701 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC7.9□□□□□ -1.14
MSH6P52701 RNU4-4P-201ENST00000364588 130 ntBASIC7.9□□□□□ -1.14
MSH6P52701 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
MSH6P52701 DUTP5-201ENST00000406790 469 ntBASIC7.9□□□□□ -1.14
MSH6P52701 AC104837.2-201ENST00000427236 424 ntBASIC7.9□□□□□ -1.14
MSH6P52701 HNRNPA3P4-201ENST00000427514 803 ntBASIC7.9□□□□□ -1.14
MSH6P52701 OR6D1P-201ENST00000436165 939 ntBASIC7.9□□□□□ -1.14
MSH6P52701 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC7.9□□□□□ -1.14
MSH6P52701 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC7.9□□□□□ -1.14
MSH6P52701 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC7.9□□□□□ -1.14
MSH6P52701 AC087783.2-201ENST00000605070 562 ntBASIC7.9□□□□□ -1.14
MSH6P52701 AC090607.5-201ENST00000615692 224 ntBASIC7.9□□□□□ -1.14
MSH6P52701 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC7.9□□□□□ -1.14
MSH6P52701 THAP12P9-201ENST00000503971 2360 ntBASIC7.9□□□□□ -1.14
MSH6P52701 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
MSH6P52701 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
MSH6P52701 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
MSH6P52701 DOCK11P1-201ENST00000553480 5932 ntBASIC7.9□□□□□ -1.14
MSH6P52701 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
MSH6P52701 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC7.9□□□□□ -1.14
MSH6P52701 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.15
MSH6P52701 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
MSH6P52701 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.15
MSH6P52701 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.15
MSH6P52701 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.9□□□□□ -1.15
MSH6P52701 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC7.9□□□□□ -1.15
MSH6P52701 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
MSH6P52701 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC7.9□□□□□ -1.15
MSH6P52701 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
MSH6P52701 AOX3P-204ENST00000491025 2107 ntBASIC7.89□□□□□ -1.15
MSH6P52701 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
MSH6P52701 OLMALINC-203ENST00000641087 3779 ntBASIC7.89□□□□□ -1.15
MSH6P52701 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
MSH6P52701 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
MSH6P52701 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
MSH6P52701 FAM96AP1-201ENST00000430879 482 ntBASIC7.89□□□□□ -1.15
MSH6P52701 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC7.89□□□□□ -1.15
MSH6P52701 AC073648.4-201ENST00000442655 781 ntBASIC7.89□□□□□ -1.15
MSH6P52701 UBE2Q2P10-201ENST00000514854 900 ntBASIC7.89□□□□□ -1.15
MSH6P52701 AC078878.1-201ENST00000539832 958 ntBASIC7.89□□□□□ -1.15
MSH6P52701 AC007494.1-201ENST00000562293 760 ntBASIC7.89□□□□□ -1.15
MSH6P52701 RN7SL371P-201ENST00000578099 267 ntBASIC7.89□□□□□ -1.15
MSH6P52701 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC7.89□□□□□ -1.15
MSH6P52701 AL683813.2-201ENST00000605245 502 ntBASIC7.89□□□□□ -1.15
MSH6P52701 AL353662.3-201ENST00000625131 237 ntBASIC7.89□□□□□ -1.15
MSH6P52701 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC7.89□□□□□ -1.15
MSH6P52701 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
MSH6P52701 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
MSH6P52701 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
MSH6P52701 CASC19-281ENST00000642118 1554 ntBASIC7.89□□□□□ -1.15
MSH6P52701 AC114947.2-201ENST00000565748 2125 ntBASIC7.89□□□□□ -1.15
MSH6P52701 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
MSH6P52701 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC7.89□□□□□ -1.15
MSH6P52701 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
MSH6P52701 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
MSH6P52701 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
MSH6P52701 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC7.89□□□□□ -1.15
MSH6P52701 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC7.89□□□□□ -1.15
MSH6P52701 AC107980.1-201ENST00000558671 3355 ntBASIC7.89□□□□□ -1.15
MSH6P52701 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC7.88□□□□□ -1.15
MSH6P52701 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
MSH6P52701 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
MSH6P52701 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
MSH6P52701 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC7.88□□□□□ -1.15
MSH6P52701 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC7.88□□□□□ -1.15
MSH6P52701 AC009963.2-201ENST00000453431 138 ntBASIC7.88□□□□□ -1.15
MSH6P52701 ACA64.4-201ENST00000459070 127 ntBASIC7.88□□□□□ -1.15
MSH6P52701 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC7.88□□□□□ -1.15
MSH6P52701 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC7.88□□□□□ -1.15
MSH6P52701 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC7.88□□□□□ -1.15
MSH6P52701 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC7.88□□□□□ -1.15
MSH6P52701 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC7.88□□□□□ -1.15
MSH6P52701 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC7.88□□□□□ -1.15
MSH6P52701 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC7.88□□□□□ -1.15
MSH6P52701 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC7.88□□□□□ -1.15
MSH6P52701 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC7.88□□□□□ -1.15
MSH6P52701 AP001885.1-201ENST00000621658 558 ntBASIC7.88□□□□□ -1.15
MSH6P52701 AP000346.3-201ENST00000622821 210 ntBASIC7.88□□□□□ -1.15
MSH6P52701 MAPK10-350ENST00000641777 965 ntBASIC7.88□□□□□ -1.15
MSH6P52701 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC7.88□□□□□ -1.15
MSH6P52701 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC7.88□□□□□ -1.15
MSH6P52701 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
MSH6P52701 DPY19L1P1-201ENST00000417811 2594 ntBASIC7.88□□□□□ -1.15
MSH6P52701 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
MSH6P52701 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC7.88□□□□□ -1.15
MSH6P52701 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
MSH6P52701 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
MSH6P52701 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
MSH6P52701 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
MSH6P52701 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC7.87□□□□□ -1.15
MSH6P52701 MIR133B-201ENST00000362210 119 ntBASIC7.87□□□□□ -1.15
MSH6P52701 RNU1-43P-201ENST00000365052 165 ntBASIC7.87□□□□□ -1.15
MSH6P52701 RNU6ATAC21P-201ENST00000408656 126 ntBASIC7.87□□□□□ -1.15
MSH6P52701 RPS3AP53-201ENST00000454716 778 ntBASIC7.87□□□□□ -1.15
MSH6P52701 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC7.87□□□□□ -1.15
MSH6P52701 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC7.87□□□□□ -1.15
MSH6P52701 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
MSH6P52701 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC7.87□□□□□ -1.15
MSH6P52701 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC7.87□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms