Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 SNORD16-201ENST00000362803 99 ntBASIC5□□□□□ -1.61
CDX1P47902 RNA5SP77-201ENST00000365394 120 ntBASIC5□□□□□ -1.61
CDX1P47902 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5□□□□□ -1.61
CDX1P47902 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDX1P47902 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CDX1P47902 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5□□□□□ -1.61
CDX1P47902 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5□□□□□ -1.61
CDX1P47902 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5□□□□□ -1.61
CDX1P47902 AC007562.1-201ENST00000421819 517 ntBASIC5□□□□□ -1.61
CDX1P47902 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5□□□□□ -1.61
CDX1P47902 AC093716.1-201ENST00000435923 377 ntBASIC5□□□□□ -1.61
CDX1P47902 AL663074.2-201ENST00000440621 479 ntBASIC5□□□□□ -1.61
CDX1P47902 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5□□□□□ -1.61
CDX1P47902 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5□□□□□ -1.61
CDX1P47902 POU5F1P5-201ENST00000445059 658 ntBASIC5□□□□□ -1.61
CDX1P47902 AC023274.2-201ENST00000445264 521 ntBASIC5□□□□□ -1.61
CDX1P47902 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5□□□□□ -1.61
CDX1P47902 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5□□□□□ -1.61
CDX1P47902 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5□□□□□ -1.61
CDX1P47902 HNRNPDLP3-201ENST00000456745 380 ntBASIC5□□□□□ -1.61
CDX1P47902 CCNJP2-201ENST00000457810 1163 ntBASIC5□□□□□ -1.61
CDX1P47902 RPL5P13-201ENST00000462840 709 ntBASIC5□□□□□ -1.61
CDX1P47902 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5□□□□□ -1.61
CDX1P47902 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5□□□□□ -1.61
CDX1P47902 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5□□□□□ -1.61
CDX1P47902 OR9A1P-202ENST00000484361 945 ntBASIC5□□□□□ -1.61
CDX1P47902 AL035690.1-201ENST00000490892 383 ntBASIC5□□□□□ -1.61
CDX1P47902 AC022206.1-201ENST00000495947 347 ntBASIC5□□□□□ -1.61
CDX1P47902 ST13P12-201ENST00000508958 1094 ntBASIC5□□□□□ -1.61
CDX1P47902 AC021146.7-201ENST00000509604 775 ntBASIC5□□□□□ -1.61
CDX1P47902 RNA5SP418-201ENST00000515951 117 ntBASIC5□□□□□ -1.61
CDX1P47902 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5□□□□□ -1.61
CDX1P47902 AC008429.4-201ENST00000521201 182 ntBASIC5□□□□□ -1.61
CDX1P47902 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5□□□□□ -1.61
CDX1P47902 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5□□□□□ -1.61
CDX1P47902 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5□□□□□ -1.61
CDX1P47902 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5□□□□□ -1.61
CDX1P47902 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5□□□□□ -1.61
CDX1P47902 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5□□□□□ -1.61
CDX1P47902 AP004372.1-201ENST00000604842 844 ntBASIC5□□□□□ -1.61
CDX1P47902 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5□□□□□ -1.61
CDX1P47902 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5□□□□□ -1.61
CDX1P47902 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5□□□□□ -1.61
CDX1P47902 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5□□□□□ -1.61
CDX1P47902 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5□□□□□ -1.61
CDX1P47902 AP001052.1-201ENST00000626421 99 ntBASIC5□□□□□ -1.61
CDX1P47902 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5□□□□□ -1.61
CDX1P47902 AL121936.2-201ENST00000641935 662 ntBASIC5□□□□□ -1.61
CDX1P47902 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDX1P47902 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDX1P47902 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDX1P47902 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5□□□□□ -1.61
CDX1P47902 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CDX1P47902 MTND4P21-201ENST00000453886 1357 ntBASIC5□□□□□ -1.61
CDX1P47902 AC002525.1-201ENST00000624392 1622 ntBASIC5□□□□□ -1.61
CDX1P47902 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5□□□□□ -1.61
CDX1P47902 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDX1P47902 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
CDX1P47902 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
CDX1P47902 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5□□□□□ -1.61
CDX1P47902 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5□□□□□ -1.61
CDX1P47902 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CDX1P47902 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5□□□□□ -1.61
CDX1P47902 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5□□□□□ -1.61
CDX1P47902 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CDX1P47902 RLIMP2-201ENST00000427891 1563 ntBASIC4.99□□□□□ -1.61
CDX1P47902 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.99□□□□□ -1.61
CDX1P47902 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDX1P47902 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
CDX1P47902 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.99□□□□□ -1.61
CDX1P47902 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDX1P47902 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CDX1P47902 MTCO1P7-201ENST00000419523 1542 ntBASIC4.99□□□□□ -1.61
CDX1P47902 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CDX1P47902 SAGE3P-201ENST00000619800 1635 ntBASIC4.99□□□□□ -1.61
CDX1P47902 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC4.99□□□□□ -1.61
CDX1P47902 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDX1P47902 AC003045.1-201ENST00000398779 713 ntBASIC4.99□□□□□ -1.61
CDX1P47902 OOSP1-201ENST00000398992 1270 ntBASIC4.99□□□□□ -1.61
CDX1P47902 AL023284.3-201ENST00000407767 334 ntBASIC4.99□□□□□ -1.61
CDX1P47902 AL139805.1-201ENST00000407837 289 ntBASIC4.99□□□□□ -1.61
CDX1P47902 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC4.99□□□□□ -1.61
CDX1P47902 AC002127.1-201ENST00000421305 225 ntBASIC4.99□□□□□ -1.61
CDX1P47902 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.99□□□□□ -1.61
CDX1P47902 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC4.99□□□□□ -1.61
CDX1P47902 PA2G4P6-201ENST00000438325 1197 ntBASIC4.99□□□□□ -1.61
CDX1P47902 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.99□□□□□ -1.61
CDX1P47902 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC4.99□□□□□ -1.61
CDX1P47902 AL353898.1-201ENST00000444055 238 ntBASIC4.99□□□□□ -1.61
CDX1P47902 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.99□□□□□ -1.61
CDX1P47902 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC4.99□□□□□ -1.61
CDX1P47902 HCG14-201ENST00000444986 413 ntTSL 2 BASIC4.99□□□□□ -1.61
CDX1P47902 COX4I1P2-201ENST00000447446 547 ntBASIC4.99□□□□□ -1.61
CDX1P47902 MTND2P25-201ENST00000449028 610 ntBASIC4.99□□□□□ -1.61
CDX1P47902 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC4.99□□□□□ -1.61
CDX1P47902 AC103563.5-201ENST00000455643 364 ntBASIC4.99□□□□□ -1.61
CDX1P47902 RPL23AP64-201ENST00000469465 435 ntBASIC4.99□□□□□ -1.61
CDX1P47902 RN7SL643P-201ENST00000471845 291 ntBASIC4.99□□□□□ -1.61
CDX1P47902 GM2AP2-201ENST00000491764 562 ntBASIC4.99□□□□□ -1.61
CDX1P47902 RPL37AP8-201ENST00000494116 276 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms