Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC021766.1-201ENST00000624404 741 ntBASIC5.93□□□□□ -1.46
SLC1A1P43005 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.93□□□□□ -1.46
SLC1A1P43005 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.93□□□□□ -1.46
SLC1A1P43005 AL137058.3-201ENST00000624531 3099 ntBASIC5.93□□□□□ -1.46
SLC1A1P43005 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
SLC1A1P43005 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
SLC1A1P43005 ADAM24P-201ENST00000398655 2101 ntBASIC5.93□□□□□ -1.46
SLC1A1P43005 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
SLC1A1P43005 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
SLC1A1P43005 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SLC1A1P43005 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.92□□□□□ -1.46
SLC1A1P43005 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
SLC1A1P43005 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.92□□□□□ -1.46
SLC1A1P43005 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SLC1A1P43005 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SLC1A1P43005 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SLC1A1P43005 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SLC1A1P43005 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SLC1A1P43005 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SLC1A1P43005 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SLC1A1P43005 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
SLC1A1P43005 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.92□□□□□ -1.46
SLC1A1P43005 RNA5SP273-201ENST00000362484 113 ntBASIC5.92□□□□□ -1.46
SLC1A1P43005 RNA5SP30-201ENST00000365552 115 ntBASIC5.92□□□□□ -1.46
SLC1A1P43005 NENFP1-201ENST00000419476 466 ntBASIC5.92□□□□□ -1.46
SLC1A1P43005 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.92□□□□□ -1.46
SLC1A1P43005 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.92□□□□□ -1.46
SLC1A1P43005 NDUFS5P5-201ENST00000437256 321 ntBASIC5.92□□□□□ -1.46
SLC1A1P43005 AMYP1-201ENST00000440059 1023 ntBASIC5.92□□□□□ -1.46
SLC1A1P43005 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.92□□□□□ -1.46
SLC1A1P43005 AC068491.1-201ENST00000449539 1241 ntBASIC5.92□□□□□ -1.46
SLC1A1P43005 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.92□□□□□ -1.46
SLC1A1P43005 AC118758.1-202ENST00000454719 225 ntBASIC5.92□□□□□ -1.46
SLC1A1P43005 RPL32P33-201ENST00000487023 394 ntBASIC5.92□□□□□ -1.46
SLC1A1P43005 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.92□□□□□ -1.46
SLC1A1P43005 AC105420.1-201ENST00000504389 582 ntBASIC5.92□□□□□ -1.46
SLC1A1P43005 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
SLC1A1P43005 RNA5SP438-201ENST00000516561 112 ntBASIC5.92□□□□□ -1.46
SLC1A1P43005 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.92□□□□□ -1.46
SLC1A1P43005 BCAS2P1-201ENST00000528022 632 ntBASIC5.92□□□□□ -1.46
SLC1A1P43005 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SLC1A1P43005 AC006512.2-201ENST00000543250 486 ntBASIC5.92□□□□□ -1.46
SLC1A1P43005 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.92□□□□□ -1.46
SLC1A1P43005 AC079905.1-201ENST00000549280 475 ntBASIC5.92□□□□□ -1.46
SLC1A1P43005 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.92□□□□□ -1.46
SLC1A1P43005 LINC00556-201ENST00000569603 412 ntBASIC5.92□□□□□ -1.46
SLC1A1P43005 H3F3BP2-201ENST00000583907 357 ntBASIC5.92□□□□□ -1.46
SLC1A1P43005 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.92□□□□□ -1.46
SLC1A1P43005 AC010487.1-201ENST00000594408 1172 ntBASIC5.92□□□□□ -1.46
SLC1A1P43005 AC063977.5-201ENST00000601044 974 ntBASIC5.92□□□□□ -1.46
SLC1A1P43005 AC024884.1-201ENST00000620583 399 ntBASIC5.92□□□□□ -1.46
SLC1A1P43005 AL683826.1-201ENST00000624104 627 ntBASIC5.92□□□□□ -1.46
SLC1A1P43005 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
SLC1A1P43005 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.92□□□□□ -1.46
SLC1A1P43005 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.92□□□□□ -1.46
SLC1A1P43005 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.92□□□□□ -1.46
SLC1A1P43005 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
SLC1A1P43005 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
SLC1A1P43005 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.92□□□□□ -1.46
SLC1A1P43005 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SLC1A1P43005 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.92□□□□□ -1.46
SLC1A1P43005 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SLC1A1P43005 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SLC1A1P43005 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.91□□□□□ -1.46
SLC1A1P43005 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SLC1A1P43005 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
SLC1A1P43005 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.91□□□□□ -1.46
SLC1A1P43005 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SLC1A1P43005 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SLC1A1P43005 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SLC1A1P43005 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SLC1A1P43005 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
SLC1A1P43005 RNU1-150P-201ENST00000362491 162 ntBASIC5.91□□□□□ -1.46
SLC1A1P43005 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SLC1A1P43005 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SLC1A1P43005 U3.28-201ENST00000391249 210 ntBASIC5.91□□□□□ -1.46
SLC1A1P43005 AL133482.1-201ENST00000415988 498 ntBASIC5.91□□□□□ -1.46
SLC1A1P43005 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.91□□□□□ -1.46
SLC1A1P43005 AL022331.1-201ENST00000429025 477 ntBASIC5.91□□□□□ -1.46
SLC1A1P43005 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.91□□□□□ -1.46
SLC1A1P43005 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.91□□□□□ -1.46
SLC1A1P43005 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.91□□□□□ -1.46
SLC1A1P43005 RPL9P15-201ENST00000491096 532 ntBASIC5.91□□□□□ -1.46
SLC1A1P43005 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.91□□□□□ -1.46
SLC1A1P43005 Y_RNA.667-201ENST00000516212 107 ntBASIC5.91□□□□□ -1.46
SLC1A1P43005 IGLV3-24-201ENST00000517477 197 ntBASIC5.91□□□□□ -1.46
SLC1A1P43005 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.91□□□□□ -1.46
SLC1A1P43005 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.91□□□□□ -1.46
SLC1A1P43005 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.91□□□□□ -1.46
SLC1A1P43005 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.91□□□□□ -1.46
SLC1A1P43005 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.91□□□□□ -1.46
SLC1A1P43005 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.91□□□□□ -1.46
SLC1A1P43005 MIR744-201ENST00000578242 98 ntBASIC5.91□□□□□ -1.46
SLC1A1P43005 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SLC1A1P43005 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.91□□□□□ -1.46
SLC1A1P43005 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SLC1A1P43005 AC129778.1-202ENST00000623812 261 ntBASIC5.91□□□□□ -1.46
SLC1A1P43005 AL591379.1-207ENST00000635982 261 ntBASIC5.91□□□□□ -1.46
SLC1A1P43005 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.91□□□□□ -1.46
SLC1A1P43005 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms