Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AC090888.3-201ENST00000558917 509 ntBASIC5.72□□□□□ -1.49
HMGCLP35914 DPPA2P4-201ENST00000563717 878 ntBASIC5.72□□□□□ -1.49
HMGCLP35914 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.72□□□□□ -1.49
HMGCLP35914 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.72□□□□□ -1.49
HMGCLP35914 AC063977.5-201ENST00000601044 974 ntBASIC5.72□□□□□ -1.49
HMGCLP35914 AC016252.1-201ENST00000609721 474 ntBASIC5.72□□□□□ -1.49
HMGCLP35914 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.72□□□□□ -1.49
HMGCLP35914 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.72□□□□□ -1.49
HMGCLP35914 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.72□□□□□ -1.49
HMGCLP35914 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMGCLP35914 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMGCLP35914 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMGCLP35914 AP000473.2-201ENST00000602659 1537 ntBASIC5.72□□□□□ -1.49
HMGCLP35914 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
HMGCLP35914 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.72□□□□□ -1.49
HMGCLP35914 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.72□□□□□ -1.49
HMGCLP35914 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.72□□□□□ -1.49
HMGCLP35914 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMGCLP35914 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
HMGCLP35914 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMGCLP35914 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.71□□□□□ -1.49
HMGCLP35914 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
HMGCLP35914 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.71□□□□□ -1.49
HMGCLP35914 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
HMGCLP35914 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.49
HMGCLP35914 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.71□□□□□ -1.5
HMGCLP35914 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.71□□□□□ -1.5
HMGCLP35914 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.71□□□□□ -1.5
HMGCLP35914 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HMGCLP35914 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HMGCLP35914 AC007842.1-201ENST00000597336 2039 ntBASIC5.71□□□□□ -1.5
HMGCLP35914 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
HMGCLP35914 RNU1-136P-201ENST00000384181 164 ntBASIC5.71□□□□□ -1.5
HMGCLP35914 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.71□□□□□ -1.5
HMGCLP35914 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.71□□□□□ -1.5
HMGCLP35914 RPS3P2-201ENST00000421346 701 ntBASIC5.71□□□□□ -1.5
HMGCLP35914 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.71□□□□□ -1.5
HMGCLP35914 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.71□□□□□ -1.5
HMGCLP35914 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.71□□□□□ -1.5
HMGCLP35914 PCNPP2-201ENST00000441651 455 ntBASIC5.71□□□□□ -1.5
HMGCLP35914 RPS7P6-201ENST00000485777 579 ntBASIC5.71□□□□□ -1.5
HMGCLP35914 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HMGCLP35914 GOLGA5P1-201ENST00000507317 980 ntBASIC5.71□□□□□ -1.5
HMGCLP35914 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HMGCLP35914 SNORA70.11-201ENST00000515987 138 ntBASIC5.71□□□□□ -1.5
HMGCLP35914 SNORA70.13-201ENST00000516116 138 ntBASIC5.71□□□□□ -1.5
HMGCLP35914 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.71□□□□□ -1.5
HMGCLP35914 IGKV2-4-201ENST00000523070 340 ntBASIC5.71□□□□□ -1.5
HMGCLP35914 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.71□□□□□ -1.5
HMGCLP35914 HMGB1P42-201ENST00000532126 553 ntBASIC5.71□□□□□ -1.5
HMGCLP35914 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.71□□□□□ -1.5
HMGCLP35914 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.71□□□□□ -1.5
HMGCLP35914 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.71□□□□□ -1.5
HMGCLP35914 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.71□□□□□ -1.5
HMGCLP35914 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.71□□□□□ -1.5
HMGCLP35914 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.71□□□□□ -1.5
HMGCLP35914 AC015802.2-201ENST00000589690 189 ntBASIC5.71□□□□□ -1.5
HMGCLP35914 AP005431.1-201ENST00000618479 319 ntBASIC5.71□□□□□ -1.5
HMGCLP35914 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.71□□□□□ -1.5
HMGCLP35914 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.71□□□□□ -1.5
HMGCLP35914 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.71□□□□□ -1.5
HMGCLP35914 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HMGCLP35914 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HMGCLP35914 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HMGCLP35914 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
HMGCLP35914 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HMGCLP35914 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HMGCLP35914 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.71□□□□□ -1.5
HMGCLP35914 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.71□□□□□ -1.5
HMGCLP35914 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
HMGCLP35914 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HMGCLP35914 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.71□□□□□ -1.5
HMGCLP35914 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
HMGCLP35914 AC125336.1-201ENST00000508893 2827 ntBASIC5.7□□□□□ -1.5
HMGCLP35914 DNM1P47-203ENST00000571780 12667 ntBASIC5.7□□□□□ -1.5
HMGCLP35914 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.7□□□□□ -1.5
HMGCLP35914 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.7□□□□□ -1.5
HMGCLP35914 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.7□□□□□ -1.5
HMGCLP35914 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
HMGCLP35914 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.7□□□□□ -1.5
HMGCLP35914 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HMGCLP35914 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
HMGCLP35914 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
HMGCLP35914 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.7□□□□□ -1.5
HMGCLP35914 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.7□□□□□ -1.5
HMGCLP35914 RNF10P1-201ENST00000418589 369 ntBASIC5.7□□□□□ -1.5
HMGCLP35914 NENFP1-201ENST00000419476 466 ntBASIC5.7□□□□□ -1.5
HMGCLP35914 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.7□□□□□ -1.5
HMGCLP35914 AC093155.2-201ENST00000420734 937 ntBASIC5.7□□□□□ -1.5
HMGCLP35914 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.7□□□□□ -1.5
HMGCLP35914 RPL5P2-201ENST00000429598 854 ntBASIC5.7□□□□□ -1.5
HMGCLP35914 AC002069.1-201ENST00000429649 1159 ntBASIC5.7□□□□□ -1.5
HMGCLP35914 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.7□□□□□ -1.5
HMGCLP35914 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.7□□□□□ -1.5
HMGCLP35914 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.7□□□□□ -1.5
HMGCLP35914 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.7□□□□□ -1.5
HMGCLP35914 RPS23P6-201ENST00000466136 431 ntBASIC5.7□□□□□ -1.5
HMGCLP35914 AC007998.1-201ENST00000474156 672 ntBASIC5.7□□□□□ -1.5
HMGCLP35914 DUTP1-201ENST00000493631 470 ntBASIC5.7□□□□□ -1.5
HMGCLP35914 ASNSP4-201ENST00000511103 447 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms