Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
TM4SF1P30408 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
TM4SF1P30408 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
TM4SF1P30408 DPY19L2P2-203ENST00000435536 1858 ntBASIC7.02□□□□□ -1.29
TM4SF1P30408 AL449283.1-201ENST00000602631 3403 ntBASIC7.02□□□□□ -1.29
TM4SF1P30408 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
TM4SF1P30408 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
TM4SF1P30408 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
TM4SF1P30408 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
TM4SF1P30408 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
TM4SF1P30408 TET1P1-201ENST00000426627 2301 ntBASIC7.01□□□□□ -1.29
TM4SF1P30408 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TM4SF1P30408 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC7.01□□□□□ -1.29
TM4SF1P30408 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TM4SF1P30408 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
TM4SF1P30408 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
TM4SF1P30408 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TM4SF1P30408 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC7.01□□□□□ -1.29
TM4SF1P30408 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TM4SF1P30408 SNORA16A-201ENST00000384342 137 ntBASIC7.01□□□□□ -1.29
TM4SF1P30408 CCL7-202ENST00000394627 696 ntTSL 3 BASIC7.01□□□□□ -1.29
TM4SF1P30408 U3.36-201ENST00000408418 213 ntBASIC7.01□□□□□ -1.29
TM4SF1P30408 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC7.01□□□□□ -1.29
TM4SF1P30408 PRUNEP1-201ENST00000425846 705 ntBASIC7.01□□□□□ -1.29
TM4SF1P30408 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
TM4SF1P30408 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TM4SF1P30408 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC7.01□□□□□ -1.29
TM4SF1P30408 MTND4LP12-201ENST00000448237 295 ntBASIC7.01□□□□□ -1.29
TM4SF1P30408 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC7.01□□□□□ -1.29
TM4SF1P30408 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC7.01□□□□□ -1.29
TM4SF1P30408 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC7.01□□□□□ -1.29
TM4SF1P30408 AC096754.1-201ENST00000508904 818 ntBASIC7.01□□□□□ -1.29
TM4SF1P30408 OR51A1P-201ENST00000511110 946 ntBASIC7.01□□□□□ -1.29
TM4SF1P30408 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC7.01□□□□□ -1.29
TM4SF1P30408 AP001922.4-201ENST00000526967 290 ntBASIC7.01□□□□□ -1.29
TM4SF1P30408 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
TM4SF1P30408 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC7.01□□□□□ -1.29
TM4SF1P30408 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC7.01□□□□□ -1.29
TM4SF1P30408 MIR4311-201ENST00000580794 100 ntBASIC7.01□□□□□ -1.29
TM4SF1P30408 AC011840.5-201ENST00000582125 771 ntBASIC7.01□□□□□ -1.29
TM4SF1P30408 AC022960.2-201ENST00000616300 666 ntBASIC7.01□□□□□ -1.29
TM4SF1P30408 AC109583.2-201ENST00000617367 129 ntBASIC7.01□□□□□ -1.29
TM4SF1P30408 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC7.01□□□□□ -1.29
TM4SF1P30408 AC004836.1-201ENST00000623032 634 ntBASIC7.01□□□□□ -1.29
TM4SF1P30408 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
TM4SF1P30408 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC7.01□□□□□ -1.29
TM4SF1P30408 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TM4SF1P30408 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
TM4SF1P30408 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
TM4SF1P30408 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC7.01□□□□□ -1.29
TM4SF1P30408 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC7.01□□□□□ -1.29
TM4SF1P30408 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC7.01□□□□□ -1.29
TM4SF1P30408 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
TM4SF1P30408 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TM4SF1P30408 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
TM4SF1P30408 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
TM4SF1P30408 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
TM4SF1P30408 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC7.01□□□□□ -1.29
TM4SF1P30408 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TM4SF1P30408 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
TM4SF1P30408 MFSD4BP1-201ENST00000513330 1552 ntBASIC7□□□□□ -1.29
TM4SF1P30408 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC7□□□□□ -1.29
TM4SF1P30408 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TM4SF1P30408 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC7□□□□□ -1.29
TM4SF1P30408 DOCK11P1-201ENST00000553480 5932 ntBASIC7□□□□□ -1.29
TM4SF1P30408 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
TM4SF1P30408 RN7SKP103-201ENST00000363848 320 ntBASIC7□□□□□ -1.29
TM4SF1P30408 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC7□□□□□ -1.29
TM4SF1P30408 SNORA67-201ENST00000384423 137 ntBASIC7□□□□□ -1.29
TM4SF1P30408 TRAV35-201ENST00000390462 330 ntBASIC7□□□□□ -1.29
TM4SF1P30408 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC7□□□□□ -1.29
TM4SF1P30408 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC7□□□□□ -1.29
TM4SF1P30408 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7□□□□□ -1.29
TM4SF1P30408 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC7□□□□□ -1.29
TM4SF1P30408 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC7□□□□□ -1.29
TM4SF1P30408 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC7□□□□□ -1.29
TM4SF1P30408 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC7□□□□□ -1.29
TM4SF1P30408 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC7□□□□□ -1.29
TM4SF1P30408 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC7□□□□□ -1.29
TM4SF1P30408 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC7□□□□□ -1.29
TM4SF1P30408 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC7□□□□□ -1.29
TM4SF1P30408 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC7□□□□□ -1.29
TM4SF1P30408 RNU6-941P-201ENST00000516346 108 ntBASIC7□□□□□ -1.29
TM4SF1P30408 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC7□□□□□ -1.29
TM4SF1P30408 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC7□□□□□ -1.29
TM4SF1P30408 DPPA3P2-202ENST00000557188 1219 ntBASIC7□□□□□ -1.29
TM4SF1P30408 AGGF1P7-201ENST00000562369 913 ntBASIC7□□□□□ -1.29
TM4SF1P30408 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC7□□□□□ -1.29
TM4SF1P30408 MIR4480-201ENST00000582492 71 ntBASIC7□□□□□ -1.29
TM4SF1P30408 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC7□□□□□ -1.29
TM4SF1P30408 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC7□□□□□ -1.29
TM4SF1P30408 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC7□□□□□ -1.29
TM4SF1P30408 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC7□□□□□ -1.29
TM4SF1P30408 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC7□□□□□ -1.29
TM4SF1P30408 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
TM4SF1P30408 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
TM4SF1P30408 PWAR1-201ENST00000624188 2414 ntBASIC7□□□□□ -1.29
TM4SF1P30408 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
TM4SF1P30408 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
TM4SF1P30408 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms