Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.89□□□□□ -1.31
SMARCA1P28370 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SMARCA1P28370 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SMARCA1P28370 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
SMARCA1P28370 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
SMARCA1P28370 AC007159.1-201ENST00000566529 4706 ntBASIC6.89□□□□□ -1.31
SMARCA1P28370 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.89□□□□□ -1.31
SMARCA1P28370 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SMARCA1P28370 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SMARCA1P28370 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SMARCA1P28370 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SMARCA1P28370 AC018628.1-201ENST00000624147 3819 ntBASIC6.88□□□□□ -1.31
SMARCA1P28370 AC093297.3-201ENST00000607056 2517 ntBASIC6.88□□□□□ -1.31
SMARCA1P28370 AC068769.1-201ENST00000474767 2426 ntBASIC6.88□□□□□ -1.31
SMARCA1P28370 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
SMARCA1P28370 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SMARCA1P28370 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
SMARCA1P28370 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.88□□□□□ -1.31
SMARCA1P28370 AC093909.5-201ENST00000621839 1799 ntBASIC6.88□□□□□ -1.31
SMARCA1P28370 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.88□□□□□ -1.31
SMARCA1P28370 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SMARCA1P28370 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.88□□□□□ -1.31
SMARCA1P28370 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.88□□□□□ -1.31
SMARCA1P28370 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SMARCA1P28370 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
SMARCA1P28370 SNORD1C-201ENST00000363315 78 ntBASIC6.88□□□□□ -1.31
SMARCA1P28370 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.88□□□□□ -1.31
SMARCA1P28370 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.88□□□□□ -1.31
SMARCA1P28370 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
SMARCA1P28370 RPL23AP17-201ENST00000401064 499 ntBASIC6.88□□□□□ -1.31
SMARCA1P28370 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
SMARCA1P28370 SNRPEP6-201ENST00000407465 277 ntBASIC6.88□□□□□ -1.31
SMARCA1P28370 MIR1203-201ENST00000408812 85 ntBASIC6.88□□□□□ -1.31
SMARCA1P28370 AC098592.2-201ENST00000413158 265 ntBASIC6.88□□□□□ -1.31
SMARCA1P28370 AL354890.1-201ENST00000413730 346 ntBASIC6.88□□□□□ -1.31
SMARCA1P28370 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.88□□□□□ -1.31
SMARCA1P28370 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.88□□□□□ -1.31
SMARCA1P28370 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC6.88□□□□□ -1.31
SMARCA1P28370 AC115283.1-201ENST00000427353 400 ntBASIC6.88□□□□□ -1.31
SMARCA1P28370 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC6.88□□□□□ -1.31
SMARCA1P28370 NDUFS5P5-201ENST00000437256 321 ntBASIC6.88□□□□□ -1.31
SMARCA1P28370 AL390879.1-201ENST00000439143 386 ntBASIC6.88□□□□□ -1.31
SMARCA1P28370 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC6.88□□□□□ -1.31
SMARCA1P28370 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC6.88□□□□□ -1.31
SMARCA1P28370 RPS10P18-201ENST00000442662 495 ntBASIC6.88□□□□□ -1.31
SMARCA1P28370 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.88□□□□□ -1.31
SMARCA1P28370 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.88□□□□□ -1.31
SMARCA1P28370 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.88□□□□□ -1.31
SMARCA1P28370 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.88□□□□□ -1.31
SMARCA1P28370 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.88□□□□□ -1.31
SMARCA1P28370 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
SMARCA1P28370 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.88□□□□□ -1.31
SMARCA1P28370 AC119751.4-201ENST00000507498 357 ntBASIC6.88□□□□□ -1.31
SMARCA1P28370 RNA5SP271-201ENST00000516700 88 ntBASIC6.88□□□□□ -1.31
SMARCA1P28370 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.88□□□□□ -1.31
SMARCA1P28370 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.88□□□□□ -1.31
SMARCA1P28370 PCNAP4-201ENST00000532690 730 ntBASIC6.88□□□□□ -1.31
SMARCA1P28370 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.88□□□□□ -1.31
SMARCA1P28370 AC091078.2-201ENST00000557145 559 ntBASIC6.88□□□□□ -1.31
SMARCA1P28370 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.88□□□□□ -1.31
SMARCA1P28370 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SMARCA1P28370 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC6.88□□□□□ -1.31
SMARCA1P28370 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.88□□□□□ -1.31
SMARCA1P28370 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
SMARCA1P28370 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC6.88□□□□□ -1.31
SMARCA1P28370 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC6.88□□□□□ -1.31
SMARCA1P28370 BNIP3P40-201ENST00000596017 556 ntBASIC6.88□□□□□ -1.31
SMARCA1P28370 AC026979.4-201ENST00000606555 645 ntBASIC6.88□□□□□ -1.31
SMARCA1P28370 AL391834.2-201ENST00000609982 546 ntBASIC6.88□□□□□ -1.31
SMARCA1P28370 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.88□□□□□ -1.31
SMARCA1P28370 AL445670.1-201ENST00000618889 801 ntBASIC6.88□□□□□ -1.31
SMARCA1P28370 AC009452.1-201ENST00000640823 606 ntBASIC6.88□□□□□ -1.31
SMARCA1P28370 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
SMARCA1P28370 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SMARCA1P28370 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
SMARCA1P28370 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
SMARCA1P28370 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SMARCA1P28370 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.88□□□□□ -1.31
SMARCA1P28370 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.88□□□□□ -1.31
SMARCA1P28370 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
SMARCA1P28370 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.87□□□□□ -1.31
SMARCA1P28370 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.87□□□□□ -1.31
SMARCA1P28370 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SMARCA1P28370 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
SMARCA1P28370 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SMARCA1P28370 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SMARCA1P28370 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
SMARCA1P28370 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SMARCA1P28370 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.87□□□□□ -1.31
SMARCA1P28370 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.87□□□□□ -1.31
SMARCA1P28370 AL451142.1-201ENST00000375867 775 ntBASIC6.87□□□□□ -1.31
SMARCA1P28370 OR2W4P-201ENST00000406496 926 ntBASIC6.87□□□□□ -1.31
SMARCA1P28370 PTGES3P2-201ENST00000407942 482 ntBASIC6.87□□□□□ -1.31
SMARCA1P28370 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.87□□□□□ -1.31
SMARCA1P28370 CDY8P-201ENST00000428380 1279 ntBASIC6.87□□□□□ -1.31
SMARCA1P28370 CDY20P-201ENST00000447528 1279 ntBASIC6.87□□□□□ -1.31
SMARCA1P28370 SLC25A51P1-201ENST00000468432 871 ntBASIC6.87□□□□□ -1.31
SMARCA1P28370 AC092902.1-201ENST00000486999 259 ntBASIC6.87□□□□□ -1.31
SMARCA1P28370 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC6.87□□□□□ -1.31
SMARCA1P28370 MTATP6P9-201ENST00000515039 680 ntBASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms