Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
XRCC1P18887 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
XRCC1P18887 AC011933.2-201ENST00000578539 2790 ntBASIC5.75□□□□□ -1.49
XRCC1P18887 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
XRCC1P18887 RN7SKP292-201ENST00000365522 317 ntBASIC5.75□□□□□ -1.49
XRCC1P18887 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
XRCC1P18887 AC092642.1-201ENST00000392417 425 ntBASIC5.75□□□□□ -1.49
XRCC1P18887 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.75□□□□□ -1.49
XRCC1P18887 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.75□□□□□ -1.49
XRCC1P18887 AL158827.1-201ENST00000416300 391 ntBASIC5.75□□□□□ -1.49
XRCC1P18887 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.75□□□□□ -1.49
XRCC1P18887 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.75□□□□□ -1.49
XRCC1P18887 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.75□□□□□ -1.49
XRCC1P18887 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
XRCC1P18887 RPL12P39-201ENST00000455456 496 ntBASIC5.75□□□□□ -1.49
XRCC1P18887 NXT1P1-201ENST00000458481 316 ntBASIC5.75□□□□□ -1.49
XRCC1P18887 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.75□□□□□ -1.49
XRCC1P18887 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.75□□□□□ -1.49
XRCC1P18887 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.75□□□□□ -1.49
XRCC1P18887 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
XRCC1P18887 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.75□□□□□ -1.49
XRCC1P18887 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.75□□□□□ -1.49
XRCC1P18887 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.75□□□□□ -1.49
XRCC1P18887 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.75□□□□□ -1.49
XRCC1P18887 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
XRCC1P18887 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
XRCC1P18887 FAM27E4-201ENST00000605259 342 ntBASIC5.75□□□□□ -1.49
XRCC1P18887 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.75□□□□□ -1.49
XRCC1P18887 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.75□□□□□ -1.49
XRCC1P18887 AL355974.3-201ENST00000617383 467 ntBASIC5.75□□□□□ -1.49
XRCC1P18887 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.75□□□□□ -1.49
XRCC1P18887 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.75□□□□□ -1.49
XRCC1P18887 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
XRCC1P18887 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
XRCC1P18887 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
XRCC1P18887 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.75□□□□□ -1.49
XRCC1P18887 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
XRCC1P18887 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
XRCC1P18887 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.75□□□□□ -1.49
XRCC1P18887 KARSP1-201ENST00000451871 1752 ntBASIC5.75□□□□□ -1.49
XRCC1P18887 AL078595.2-201ENST00000605309 1780 ntBASIC5.75□□□□□ -1.49
XRCC1P18887 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.75□□□□□ -1.49
XRCC1P18887 OR13C1P-202ENST00000641378 2919 ntBASIC5.75□□□□□ -1.49
XRCC1P18887 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
XRCC1P18887 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
XRCC1P18887 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
XRCC1P18887 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
XRCC1P18887 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.74□□□□□ -1.49
XRCC1P18887 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
XRCC1P18887 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
XRCC1P18887 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
XRCC1P18887 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
XRCC1P18887 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
XRCC1P18887 RNA5SP500-201ENST00000364486 119 ntBASIC5.74□□□□□ -1.49
XRCC1P18887 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
XRCC1P18887 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.74□□□□□ -1.49
XRCC1P18887 AC017078.1-201ENST00000416146 368 ntBASIC5.74□□□□□ -1.49
XRCC1P18887 AC126120.1-201ENST00000431082 470 ntBASIC5.74□□□□□ -1.49
XRCC1P18887 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.74□□□□□ -1.49
XRCC1P18887 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.74□□□□□ -1.49
XRCC1P18887 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.74□□□□□ -1.49
XRCC1P18887 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.74□□□□□ -1.49
XRCC1P18887 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.74□□□□□ -1.49
XRCC1P18887 SETP20-201ENST00000457046 852 ntBASIC5.74□□□□□ -1.49
XRCC1P18887 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.74□□□□□ -1.49
XRCC1P18887 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.74□□□□□ -1.49
XRCC1P18887 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.74□□□□□ -1.49
XRCC1P18887 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.74□□□□□ -1.49
XRCC1P18887 HMGN2P36-201ENST00000529541 409 ntBASIC5.74□□□□□ -1.49
XRCC1P18887 AC091078.2-201ENST00000557145 559 ntBASIC5.74□□□□□ -1.49
XRCC1P18887 OOSP1P2-201ENST00000579644 351 ntBASIC5.74□□□□□ -1.49
XRCC1P18887 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.74□□□□□ -1.49
XRCC1P18887 AL445670.1-201ENST00000618889 801 ntBASIC5.74□□□□□ -1.49
XRCC1P18887 AL512356.3-201ENST00000623005 461 ntBASIC5.74□□□□□ -1.49
XRCC1P18887 AL355480.1-201ENST00000629041 99 ntBASIC5.74□□□□□ -1.49
XRCC1P18887 AC103703.1-201ENST00000634783 663 ntBASIC5.74□□□□□ -1.49
XRCC1P18887 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.74□□□□□ -1.49
XRCC1P18887 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.74□□□□□ -1.49
XRCC1P18887 AC008691.1-209ENST00000642094 814 ntBASIC5.74□□□□□ -1.49
XRCC1P18887 NEPNP-201ENST00000404786 1371 ntBASIC5.74□□□□□ -1.49
XRCC1P18887 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
XRCC1P18887 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.74□□□□□ -1.49
XRCC1P18887 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.74□□□□□ -1.49
XRCC1P18887 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
XRCC1P18887 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
XRCC1P18887 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
XRCC1P18887 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
XRCC1P18887 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.74□□□□□ -1.49
XRCC1P18887 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
XRCC1P18887 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
XRCC1P18887 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
XRCC1P18887 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
XRCC1P18887 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
XRCC1P18887 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.73□□□□□ -1.49
XRCC1P18887 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.73□□□□□ -1.49
XRCC1P18887 OR4G1P-202ENST00000641173 1788 ntBASIC5.73□□□□□ -1.49
XRCC1P18887 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
XRCC1P18887 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
XRCC1P18887 RNF19BPY-201ENST00000458209 1550 ntBASIC5.73□□□□□ -1.49
XRCC1P18887 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms