Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 NMNAT1P5-201ENST00000559657 841 ntBASIC4.81□□□□□ -1.64
CD74P04233 AC138207.8-204ENST00000579588 527 ntBASIC4.81□□□□□ -1.64
CD74P04233 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.81□□□□□ -1.64
CD74P04233 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC4.81□□□□□ -1.64
CD74P04233 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC4.81□□□□□ -1.64
CD74P04233 COX6CP7-201ENST00000597056 208 ntBASIC4.81□□□□□ -1.64
CD74P04233 AC009237.13-201ENST00000603193 276 ntBASIC4.81□□□□□ -1.64
CD74P04233 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC4.81□□□□□ -1.64
CD74P04233 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CD74P04233 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
CD74P04233 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CD74P04233 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CD74P04233 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CD74P04233 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
CD74P04233 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.81□□□□□ -1.64
CD74P04233 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.81□□□□□ -1.64
CD74P04233 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CD74P04233 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.81□□□□□ -1.64
CD74P04233 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.81□□□□□ -1.64
CD74P04233 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
CD74P04233 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CD74P04233 CDC27P2-201ENST00000425026 1922 ntBASIC4.8□□□□□ -1.64
CD74P04233 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.8□□□□□ -1.64
CD74P04233 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CD74P04233 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CD74P04233 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC4.8□□□□□ -1.64
CD74P04233 SELENOWP1-201ENST00000322792 252 ntBASIC4.8□□□□□ -1.64
CD74P04233 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CD74P04233 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CD74P04233 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CD74P04233 MIR191-201ENST00000384873 92 ntBASIC4.8□□□□□ -1.64
CD74P04233 MIR130A-201ENST00000385274 89 ntBASIC4.8□□□□□ -1.64
CD74P04233 RNA5SP241-201ENST00000391326 114 ntBASIC4.8□□□□□ -1.64
CD74P04233 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CD74P04233 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CD74P04233 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC4.8□□□□□ -1.64
CD74P04233 RPL35AP3-201ENST00000414680 288 ntBASIC4.8□□□□□ -1.64
CD74P04233 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.8□□□□□ -1.64
CD74P04233 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
CD74P04233 RPL12P49-201ENST00000441100 121 ntBASIC4.8□□□□□ -1.64
CD74P04233 AL445466.1-201ENST00000448432 357 ntBASIC4.8□□□□□ -1.64
CD74P04233 OR52E7P-201ENST00000452394 933 ntBASIC4.8□□□□□ -1.64
CD74P04233 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC4.8□□□□□ -1.64
CD74P04233 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC4.8□□□□□ -1.64
CD74P04233 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.8□□□□□ -1.64
CD74P04233 RN7SL188P-201ENST00000469842 285 ntBASIC4.8□□□□□ -1.64
CD74P04233 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.8□□□□□ -1.64
CD74P04233 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CD74P04233 AC069304.1-201ENST00000491593 704 ntBASIC4.8□□□□□ -1.64
CD74P04233 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CD74P04233 DUTP1-201ENST00000493631 470 ntBASIC4.8□□□□□ -1.64
CD74P04233 RNU6-513P-201ENST00000516104 104 ntBASIC4.8□□□□□ -1.64
CD74P04233 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC4.8□□□□□ -1.64
CD74P04233 TMEM97P2-201ENST00000517841 403 ntBASIC4.8□□□□□ -1.64
CD74P04233 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC4.8□□□□□ -1.64
CD74P04233 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.8□□□□□ -1.64
CD74P04233 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CD74P04233 AC005632.2-201ENST00000564271 828 ntBASIC4.8□□□□□ -1.64
CD74P04233 AC106730.2-201ENST00000566641 540 ntBASIC4.8□□□□□ -1.64
CD74P04233 MRPS21P8-201ENST00000569196 235 ntBASIC4.8□□□□□ -1.64
CD74P04233 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CD74P04233 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC4.8□□□□□ -1.64
CD74P04233 MIR3157-201ENST00000578688 85 ntBASIC4.8□□□□□ -1.64
CD74P04233 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC4.8□□□□□ -1.64
CD74P04233 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC4.8□□□□□ -1.64
CD74P04233 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC4.8□□□□□ -1.64
CD74P04233 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC4.8□□□□□ -1.64
CD74P04233 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.8□□□□□ -1.64
CD74P04233 AC073488.3-201ENST00000631611 778 ntBASIC4.8□□□□□ -1.64
CD74P04233 FRG1EP-201ENST00000634469 770 ntBASIC4.8□□□□□ -1.64
CD74P04233 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
CD74P04233 MTCO1P28-201ENST00000574177 1528 ntBASIC4.8□□□□□ -1.64
CD74P04233 AC011503.2-201ENST00000594230 1500 ntBASIC4.8□□□□□ -1.64
CD74P04233 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CD74P04233 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
CD74P04233 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CD74P04233 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC4.8□□□□□ -1.64
CD74P04233 AC027088.4-201ENST00000611559 1947 ntBASIC4.8□□□□□ -1.64
CD74P04233 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.79□□□□□ -1.64
CD74P04233 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CD74P04233 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CD74P04233 AC073136.1-201ENST00000449426 2884 ntBASIC4.79□□□□□ -1.64
CD74P04233 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC4.79□□□□□ -1.64
CD74P04233 AL359715.3-201ENST00000569267 2123 ntBASIC4.79□□□□□ -1.64
CD74P04233 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.79□□□□□ -1.64
CD74P04233 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.79□□□□□ -1.64
CD74P04233 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.79□□□□□ -1.64
CD74P04233 AC093849.1-201ENST00000563631 2209 ntBASIC4.79□□□□□ -1.64
CD74P04233 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC4.79□□□□□ -1.64
CD74P04233 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CD74P04233 RNA5SP77-201ENST00000365394 120 ntBASIC4.79□□□□□ -1.64
CD74P04233 YWHAZP4-201ENST00000392459 708 ntBASIC4.79□□□□□ -1.64
CD74P04233 AC002524.1-201ENST00000411687 547 ntBASIC4.79□□□□□ -1.64
CD74P04233 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC4.79□□□□□ -1.64
CD74P04233 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.79□□□□□ -1.64
CD74P04233 GNG5P5-201ENST00000420444 220 ntBASIC4.79□□□□□ -1.64
CD74P04233 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC4.79□□□□□ -1.64
CD74P04233 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC4.79□□□□□ -1.64
CD74P04233 GAPDHP19-201ENST00000431768 1005 ntBASIC4.79□□□□□ -1.64
CD74P04233 AC128677.1-201ENST00000436016 442 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms