Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TNFP01375 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TNFP01375 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
TNFP01375 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TNFP01375 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TNFP01375 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
TNFP01375 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.55□□□□□ -1.52
TNFP01375 AL117378.2-201ENST00000622916 1337 ntBASIC5.55□□□□□ -1.52
TNFP01375 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.55□□□□□ -1.52
TNFP01375 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TNFP01375 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TNFP01375 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
TNFP01375 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
TNFP01375 GAPDHP24-201ENST00000328713 983 ntBASIC5.55□□□□□ -1.52
TNFP01375 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.55□□□□□ -1.52
TNFP01375 RN7SKP28-201ENST00000364770 305 ntBASIC5.55□□□□□ -1.52
TNFP01375 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TNFP01375 RNA5SP251-201ENST00000410614 137 ntBASIC5.55□□□□□ -1.52
TNFP01375 OR5W1P-201ENST00000423705 938 ntBASIC5.55□□□□□ -1.52
TNFP01375 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.55□□□□□ -1.52
TNFP01375 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.55□□□□□ -1.52
TNFP01375 CYCSP51-201ENST00000443545 318 ntBASIC5.55□□□□□ -1.52
TNFP01375 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.55□□□□□ -1.52
TNFP01375 NPM1P19-201ENST00000450070 712 ntBASIC5.55□□□□□ -1.52
TNFP01375 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.55□□□□□ -1.52
TNFP01375 AC026348.1-201ENST00000462549 1053 ntBASIC5.55□□□□□ -1.52
TNFP01375 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.55□□□□□ -1.52
TNFP01375 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.55□□□□□ -1.52
TNFP01375 HSPE1P2-201ENST00000554777 306 ntBASIC5.55□□□□□ -1.52
TNFP01375 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TNFP01375 AC007448.1-201ENST00000582714 234 ntBASIC5.55□□□□□ -1.52
TNFP01375 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.55□□□□□ -1.52
TNFP01375 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.55□□□□□ -1.52
TNFP01375 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.55□□□□□ -1.52
TNFP01375 SUMO2P15-201ENST00000604285 278 ntBASIC5.55□□□□□ -1.52
TNFP01375 PPATP2-201ENST00000605635 508 ntBASIC5.55□□□□□ -1.52
TNFP01375 BX323046.1-201ENST00000610145 535 ntBASIC5.55□□□□□ -1.52
TNFP01375 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.55□□□□□ -1.52
TNFP01375 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TNFP01375 MIR8080-201ENST00000622224 89 ntBASIC5.55□□□□□ -1.52
TNFP01375 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.55□□□□□ -1.52
TNFP01375 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
TNFP01375 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TNFP01375 AC123769.1-201ENST00000530992 3192 ntBASIC5.55□□□□□ -1.52
TNFP01375 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.55□□□□□ -1.52
TNFP01375 AP000547.3-204ENST00000588548 2523 ntBASIC5.55□□□□□ -1.52
TNFP01375 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
TNFP01375 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.55□□□□□ -1.52
TNFP01375 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TNFP01375 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TNFP01375 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TNFP01375 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TNFP01375 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC5.54□□□□□ -1.52
TNFP01375 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TNFP01375 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.54□□□□□ -1.52
TNFP01375 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.54□□□□□ -1.52
TNFP01375 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TNFP01375 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TNFP01375 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
TNFP01375 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TNFP01375 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.54□□□□□ -1.52
TNFP01375 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC5.54□□□□□ -1.52
TNFP01375 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TNFP01375 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
TNFP01375 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.54□□□□□ -1.52
TNFP01375 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
TNFP01375 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.54□□□□□ -1.52
TNFP01375 MIR551A-201ENST00000385042 96 ntBASIC5.54□□□□□ -1.52
TNFP01375 AL355433.1-201ENST00000422804 300 ntBASIC5.54□□□□□ -1.52
TNFP01375 CFL1P1-202ENST00000432948 411 ntBASIC5.54□□□□□ -1.52
TNFP01375 LDHAP2-201ENST00000437325 985 ntBASIC5.54□□□□□ -1.52
TNFP01375 AC006335.2-201ENST00000437993 330 ntBASIC5.54□□□□□ -1.52
TNFP01375 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.54□□□□□ -1.52
TNFP01375 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.54□□□□□ -1.52
TNFP01375 RSU1P1-201ENST00000453416 441 ntBASIC5.54□□□□□ -1.52
TNFP01375 AC110749.1-201ENST00000462007 357 ntBASIC5.54□□□□□ -1.52
TNFP01375 RPL35AP19-201ENST00000469425 329 ntBASIC5.54□□□□□ -1.52
TNFP01375 RN7SL547P-201ENST00000490793 290 ntBASIC5.54□□□□□ -1.52
TNFP01375 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.54□□□□□ -1.52
TNFP01375 RN7SKP99-201ENST00000517028 307 ntBASIC5.54□□□□□ -1.52
TNFP01375 IGKV2-19-201ENST00000518132 283 ntBASIC5.54□□□□□ -1.52
TNFP01375 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.54□□□□□ -1.52
TNFP01375 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.54□□□□□ -1.52
TNFP01375 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.54□□□□□ -1.52
TNFP01375 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
TNFP01375 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.54□□□□□ -1.52
TNFP01375 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.54□□□□□ -1.52
TNFP01375 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.54□□□□□ -1.52
TNFP01375 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.54□□□□□ -1.52
TNFP01375 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.54□□□□□ -1.52
TNFP01375 AC005840.5-201ENST00000619166 599 ntBASIC5.54□□□□□ -1.52
TNFP01375 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.54□□□□□ -1.52
TNFP01375 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TNFP01375 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
TNFP01375 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TNFP01375 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
TNFP01375 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
TNFP01375 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.54□□□□□ -1.52
TNFP01375 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TNFP01375 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms