Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 PPIAP24-201ENST00000328558 471 ntBASIC6.21□□□□□ -1.42
HMGB1P1B2RPK0 SNORA43.1-201ENST00000364863 140 ntBASIC6.21□□□□□ -1.42
HMGB1P1B2RPK0 RN7SKP130-201ENST00000364924 301 ntBASIC6.21□□□□□ -1.42
HMGB1P1B2RPK0 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
HMGB1P1B2RPK0 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC6.21□□□□□ -1.42
HMGB1P1B2RPK0 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
HMGB1P1B2RPK0 HIST1H2BPS2-201ENST00000402707 340 ntBASIC6.21□□□□□ -1.42
HMGB1P1B2RPK0 AC105402.1-201ENST00000413336 545 ntBASIC6.21□□□□□ -1.42
HMGB1P1B2RPK0 RPL12P34-201ENST00000424532 479 ntBASIC6.21□□□□□ -1.42
HMGB1P1B2RPK0 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.21□□□□□ -1.42
HMGB1P1B2RPK0 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC6.21□□□□□ -1.42
HMGB1P1B2RPK0 PRKAR1AP1-201ENST00000441422 1162 ntBASIC6.21□□□□□ -1.42
HMGB1P1B2RPK0 CCNJP1-201ENST00000450600 1149 ntBASIC6.21□□□□□ -1.42
HMGB1P1B2RPK0 RN7SL714P-201ENST00000487050 298 ntBASIC6.21□□□□□ -1.42
HMGB1P1B2RPK0 RPL34P29-201ENST00000491411 325 ntBASIC6.21□□□□□ -1.42
HMGB1P1B2RPK0 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.21□□□□□ -1.42
HMGB1P1B2RPK0 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.21□□□□□ -1.42
HMGB1P1B2RPK0 AC138517.1-201ENST00000515724 568 ntBASIC6.21□□□□□ -1.42
HMGB1P1B2RPK0 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC6.21□□□□□ -1.42
HMGB1P1B2RPK0 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HMGB1P1B2RPK0 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC6.21□□□□□ -1.42
HMGB1P1B2RPK0 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.21□□□□□ -1.42
HMGB1P1B2RPK0 AC105243.1-202ENST00000583942 847 ntTSL 3 BASIC6.21□□□□□ -1.42
HMGB1P1B2RPK0 RN7SL664P-201ENST00000584239 305 ntBASIC6.21□□□□□ -1.42
HMGB1P1B2RPK0 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.21□□□□□ -1.42
HMGB1P1B2RPK0 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.21□□□□□ -1.42
HMGB1P1B2RPK0 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC6.21□□□□□ -1.42
HMGB1P1B2RPK0 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC6.21□□□□□ -1.42
HMGB1P1B2RPK0 AL137067.2-201ENST00000621202 131 ntBASIC6.21□□□□□ -1.42
HMGB1P1B2RPK0 AC022400.9-201ENST00000623633 273 ntBASIC6.21□□□□□ -1.42
HMGB1P1B2RPK0 AC005753.1-201ENST00000623837 618 ntBASIC6.21□□□□□ -1.42
HMGB1P1B2RPK0 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC6.21□□□□□ -1.42
HMGB1P1B2RPK0 OR2L1P-202ENST00000641567 1023 ntBASIC6.21□□□□□ -1.42
HMGB1P1B2RPK0 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HMGB1P1B2RPK0 AC104118.1-201ENST00000607625 1589 ntBASIC6.21□□□□□ -1.42
HMGB1P1B2RPK0 AC092701.1-201ENST00000623627 1551 ntBASIC6.21□□□□□ -1.42
HMGB1P1B2RPK0 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC6.21□□□□□ -1.42
HMGB1P1B2RPK0 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
HMGB1P1B2RPK0 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
HMGB1P1B2RPK0 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HMGB1P1B2RPK0 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
HMGB1P1B2RPK0 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HMGB1P1B2RPK0 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 AC004158.1-201ENST00000564508 4319 ntBASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 CYP1D1P-201ENST00000416662 1433 ntBASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 RANP6-201ENST00000413691 644 ntBASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 AC009965.2-201ENST00000425328 970 ntBASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 MED28P3-201ENST00000444288 531 ntBASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 AC239809.1-201ENST00000450470 217 ntBASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 RPL23AP40-201ENST00000487630 390 ntBASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 TMEM150C-203ENST00000508701 566 ntTSL 4 BASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 AP001000.1-201ENST00000526843 742 ntBASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 REG4-204ENST00000530654 612 ntTSL 5 BASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 OR4A43P-201ENST00000532938 908 ntBASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 CIPC-206ENST00000555611 599 ntTSL 4 BASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 AC009852.2-201ENST00000567898 485 ntBASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 MIR5682-201ENST00000584864 76 ntBASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 KATNBL1P1-201ENST00000605192 748 ntBASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 CR589904.2-201ENST00000612533 440 ntBASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 FRG2MP-201ENST00000613317 856 ntBASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 AL355974.3-201ENST00000617383 467 ntBASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 FKBP1AP4-201ENST00000631775 336 ntBASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 AC024587.1-201ENST00000505925 2157 ntBASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 OR9K1P-202ENST00000641111 3217 ntBASIC6.2□□□□□ -1.42
HMGB1P1B2RPK0 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.19□□□□□ -1.42
HMGB1P1B2RPK0 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 152.4 ms