Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC28.31■■■□□ 2.12
SLC52A1Q9NWF4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC28.31■■■□□ 2.12
SLC52A1Q9NWF4 HOMER2P1-201ENST00000455653 964 ntBASIC28.31■■■□□ 2.12
SLC52A1Q9NWF4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC28.31■■■□□ 2.12
SLC52A1Q9NWF4 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC28.31■■■□□ 2.12
SLC52A1Q9NWF4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC28.31■■■□□ 2.12
SLC52A1Q9NWF4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SLC52A1Q9NWF4 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC28.31■■■□□ 2.12
SLC52A1Q9NWF4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
SLC52A1Q9NWF4 KRT8P8-201ENST00000434750 1448 ntBASIC28.31■■■□□ 2.12
SLC52A1Q9NWF4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
SLC52A1Q9NWF4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SLC52A1Q9NWF4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SLC52A1Q9NWF4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
SLC52A1Q9NWF4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
SLC52A1Q9NWF4 EP400NL-214ENST00000641289 2402 ntBASIC28.3■■■□□ 2.12
SLC52A1Q9NWF4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SLC52A1Q9NWF4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
SLC52A1Q9NWF4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC28.3■■■□□ 2.12
SLC52A1Q9NWF4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC28.3■■■□□ 2.12
SLC52A1Q9NWF4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
SLC52A1Q9NWF4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC28.3■■■□□ 2.12
SLC52A1Q9NWF4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
SLC52A1Q9NWF4 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
SLC52A1Q9NWF4 KRT18P56-201ENST00000507275 550 ntBASIC28.3■■■□□ 2.12
SLC52A1Q9NWF4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SLC52A1Q9NWF4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SLC52A1Q9NWF4 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
SLC52A1Q9NWF4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
SLC52A1Q9NWF4 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC28.29■■■□□ 2.12
SLC52A1Q9NWF4 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC28.29■■■□□ 2.12
SLC52A1Q9NWF4 KRT126P-201ENST00000549467 1181 ntBASIC28.29■■■□□ 2.12
SLC52A1Q9NWF4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
SLC52A1Q9NWF4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SLC52A1Q9NWF4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SLC52A1Q9NWF4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC28.29■■■□□ 2.12
SLC52A1Q9NWF4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
SLC52A1Q9NWF4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC28.28■■■□□ 2.12
SLC52A1Q9NWF4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
SLC52A1Q9NWF4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
SLC52A1Q9NWF4 BET1L-202ENST00000332865 533 ntTSL 5 BASIC28.28■■■□□ 2.12
SLC52A1Q9NWF4 ANKRD20A18P-201ENST00000359341 492 ntBASIC28.28■■■□□ 2.12
SLC52A1Q9NWF4 PCED1CP-201ENST00000419887 785 ntBASIC28.28■■■□□ 2.12
SLC52A1Q9NWF4 NME1-207ENST00000480143 964 ntTSL 2 BASIC28.28■■■□□ 2.12
SLC52A1Q9NWF4 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC28.28■■■□□ 2.12
SLC52A1Q9NWF4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC28.28■■■□□ 2.12
SLC52A1Q9NWF4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC28.28■■■□□ 2.12
SLC52A1Q9NWF4 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SLC52A1Q9NWF4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC28.28■■■□□ 2.12
SLC52A1Q9NWF4 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
SLC52A1Q9NWF4 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SLC52A1Q9NWF4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SLC52A1Q9NWF4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SLC52A1Q9NWF4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
SLC52A1Q9NWF4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SLC52A1Q9NWF4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC28.27■■■□□ 2.12
SLC52A1Q9NWF4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC28.27■■■□□ 2.12
SLC52A1Q9NWF4 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SLC52A1Q9NWF4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SLC52A1Q9NWF4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SLC52A1Q9NWF4 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
SLC52A1Q9NWF4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC28.27■■■□□ 2.12
SLC52A1Q9NWF4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC28.27■■■□□ 2.12
SLC52A1Q9NWF4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC28.27■■■□□ 2.12
SLC52A1Q9NWF4 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SLC52A1Q9NWF4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
SLC52A1Q9NWF4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SLC52A1Q9NWF4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
SLC52A1Q9NWF4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC28.27■■■□□ 2.12
SLC52A1Q9NWF4 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SLC52A1Q9NWF4 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC28.26■■■□□ 2.12
SLC52A1Q9NWF4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
SLC52A1Q9NWF4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC28.26■■■□□ 2.11
SLC52A1Q9NWF4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.11
SLC52A1Q9NWF4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
SLC52A1Q9NWF4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC28.26■■■□□ 2.11
SLC52A1Q9NWF4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC28.26■■■□□ 2.11
SLC52A1Q9NWF4 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC28.26■■■□□ 2.11
SLC52A1Q9NWF4 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC28.26■■■□□ 2.11
SLC52A1Q9NWF4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC28.26■■■□□ 2.11
SLC52A1Q9NWF4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
SLC52A1Q9NWF4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
SLC52A1Q9NWF4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC28.26■■■□□ 2.11
SLC52A1Q9NWF4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
SLC52A1Q9NWF4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
SLC52A1Q9NWF4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
SLC52A1Q9NWF4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC28.25■■■□□ 2.11
SLC52A1Q9NWF4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC28.25■■■□□ 2.11
SLC52A1Q9NWF4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC28.25■■■□□ 2.11
SLC52A1Q9NWF4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC28.25■■■□□ 2.11
SLC52A1Q9NWF4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
SLC52A1Q9NWF4 AF106564.1-201ENST00000607058 2553 ntBASIC28.25■■■□□ 2.11
SLC52A1Q9NWF4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
SLC52A1Q9NWF4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
SLC52A1Q9NWF4 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC28.24■■■□□ 2.11
SLC52A1Q9NWF4 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
SLC52A1Q9NWF4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
SLC52A1Q9NWF4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC28.24■■■□□ 2.11
SLC52A1Q9NWF4 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC28.24■■■□□ 2.11
SLC52A1Q9NWF4 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC28.24■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms