Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Chmp1aQ921W0 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC14.96□□□□□ -0.01
Chmp1aQ921W0 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.96□□□□□ -0.01
Chmp1aQ921W0 Gm18671-201ENSMUST00000214826 683 ntBASIC14.96□□□□□ -0.01
Chmp1aQ921W0 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp1aQ921W0 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Chmp1aQ921W0 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.96□□□□□ -0.01
Chmp1aQ921W0 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp1aQ921W0 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chmp1aQ921W0 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Chmp1aQ921W0 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.96□□□□□ -0.02
Chmp1aQ921W0 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
Chmp1aQ921W0 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
Chmp1aQ921W0 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Chmp1aQ921W0 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.95□□□□□ -0.02
Chmp1aQ921W0 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1aQ921W0 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1aQ921W0 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1aQ921W0 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Chmp1aQ921W0 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Chmp1aQ921W0 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1aQ921W0 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1aQ921W0 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1aQ921W0 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1aQ921W0 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Chmp1aQ921W0 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Chmp1aQ921W0 Gm13401-201ENSMUST00000117074 291 ntBASIC14.95□□□□□ -0.02
Chmp1aQ921W0 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC14.95□□□□□ -0.02
Chmp1aQ921W0 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1aQ921W0 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1aQ921W0 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1aQ921W0 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.95□□□□□ -0.02
Chmp1aQ921W0 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1aQ921W0 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Chmp1aQ921W0 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1aQ921W0 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.95□□□□□ -0.02
Chmp1aQ921W0 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1aQ921W0 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1aQ921W0 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1aQ921W0 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chmp1aQ921W0 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp1aQ921W0 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp1aQ921W0 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp1aQ921W0 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Chmp1aQ921W0 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp1aQ921W0 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Chmp1aQ921W0 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Chmp1aQ921W0 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Chmp1aQ921W0 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
Chmp1aQ921W0 Mir2861-201ENSMUST00000175539 82 ntBASIC14.94□□□□□ -0.02
Chmp1aQ921W0 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.94□□□□□ -0.02
Chmp1aQ921W0 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp1aQ921W0 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp1aQ921W0 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp1aQ921W0 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Chmp1aQ921W0 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp1aQ921W0 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp1aQ921W0 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp1aQ921W0 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp1aQ921W0 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp1aQ921W0 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp1aQ921W0 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.94□□□□□ -0.02
Chmp1aQ921W0 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
Chmp1aQ921W0 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp1aQ921W0 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1aQ921W0 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Chmp1aQ921W0 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1aQ921W0 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1aQ921W0 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.93□□□□□ -0.02
Chmp1aQ921W0 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1aQ921W0 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1aQ921W0 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1aQ921W0 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Chmp1aQ921W0 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1aQ921W0 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1aQ921W0 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1aQ921W0 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1aQ921W0 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC14.93□□□□□ -0.02
Chmp1aQ921W0 Gm7291-201ENSMUST00000199147 382 ntBASIC14.93□□□□□ -0.02
Chmp1aQ921W0 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.93□□□□□ -0.02
Chmp1aQ921W0 Gm10033-202ENSMUST00000211874 928 ntBASIC14.93□□□□□ -0.02
Chmp1aQ921W0 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.93□□□□□ -0.02
Chmp1aQ921W0 Gm6365-201ENSMUST00000054711 744 ntBASIC14.93□□□□□ -0.02
Chmp1aQ921W0 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1aQ921W0 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1aQ921W0 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1aQ921W0 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1aQ921W0 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.93□□□□□ -0.02
Chmp1aQ921W0 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1aQ921W0 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1aQ921W0 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1aQ921W0 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1aQ921W0 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp1aQ921W0 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp1aQ921W0 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.92□□□□□ -0.02
Chmp1aQ921W0 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp1aQ921W0 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp1aQ921W0 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp1aQ921W0 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp1aQ921W0 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms