Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AL645929.1-201ENST00000420084 975 ntBASIC17.15■□□□□ 0.34
LRRK2Q5S007 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.15■□□□□ 0.34
LRRK2Q5S007 RNA5SP419-201ENST00000515908 135 ntBASIC17.15■□□□□ 0.34
LRRK2Q5S007 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
LRRK2Q5S007 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
LRRK2Q5S007 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.15■□□□□ 0.34
LRRK2Q5S007 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRK2Q5S007 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRK2Q5S007 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
LRRK2Q5S007 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
LRRK2Q5S007 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.15■□□□□ 0.34
LRRK2Q5S007 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRK2Q5S007 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.15■□□□□ 0.34
LRRK2Q5S007 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.15■□□□□ 0.34
LRRK2Q5S007 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRK2Q5S007 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.15■□□□□ 0.34
LRRK2Q5S007 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.15■□□□□ 0.34
LRRK2Q5S007 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.15■□□□□ 0.34
LRRK2Q5S007 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.15■□□□□ 0.34
LRRK2Q5S007 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRRK2Q5S007 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.15■□□□□ 0.34
LRRK2Q5S007 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRK2Q5S007 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRK2Q5S007 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRK2Q5S007 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.14■□□□□ 0.33
LRRK2Q5S007 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRK2Q5S007 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.14■□□□□ 0.33
LRRK2Q5S007 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRRK2Q5S007 KRT18P31-201ENST00000506277 1292 ntBASIC17.14■□□□□ 0.33
LRRK2Q5S007 AC092329.2-201ENST00000598402 547 ntBASIC17.14■□□□□ 0.33
LRRK2Q5S007 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
LRRK2Q5S007 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.14■□□□□ 0.33
LRRK2Q5S007 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRK2Q5S007 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRK2Q5S007 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.14■□□□□ 0.33
LRRK2Q5S007 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.14■□□□□ 0.33
LRRK2Q5S007 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRK2Q5S007 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRK2Q5S007 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRRK2Q5S007 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
LRRK2Q5S007 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.14■□□□□ 0.33
LRRK2Q5S007 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRK2Q5S007 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRK2Q5S007 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.14■□□□□ 0.33
LRRK2Q5S007 TSPY12P-201ENST00000421279 868 ntBASIC17.14■□□□□ 0.33
LRRK2Q5S007 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
LRRK2Q5S007 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
LRRK2Q5S007 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRRK2Q5S007 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRK2Q5S007 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
LRRK2Q5S007 MRPL3P1-201ENST00000400109 1033 ntBASIC17.13■□□□□ 0.33
LRRK2Q5S007 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.13■□□□□ 0.33
LRRK2Q5S007 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRK2Q5S007 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.13■□□□□ 0.33
LRRK2Q5S007 GCSHP2-201ENST00000560971 527 ntBASIC17.13■□□□□ 0.33
LRRK2Q5S007 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.13■□□□□ 0.33
LRRK2Q5S007 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRK2Q5S007 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRRK2Q5S007 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRK2Q5S007 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
LRRK2Q5S007 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.13■□□□□ 0.33
LRRK2Q5S007 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRRK2Q5S007 MIR1233-2-201ENST00000408138 82 ntBASIC17.13■□□□□ 0.33
LRRK2Q5S007 MIR1233-1-201ENST00000408722 82 ntBASIC17.13■□□□□ 0.33
LRRK2Q5S007 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
LRRK2Q5S007 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRRK2Q5S007 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
LRRK2Q5S007 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
LRRK2Q5S007 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRK2Q5S007 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRRK2Q5S007 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRK2Q5S007 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRRK2Q5S007 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.12■□□□□ 0.33
LRRK2Q5S007 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRRK2Q5S007 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRK2Q5S007 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRK2Q5S007 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRRK2Q5S007 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.12■□□□□ 0.33
LRRK2Q5S007 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.12■□□□□ 0.33
LRRK2Q5S007 KRT16P4-201ENST00000453883 522 ntBASIC17.12■□□□□ 0.33
LRRK2Q5S007 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.12■□□□□ 0.33
LRRK2Q5S007 AC011498.5-201ENST00000592027 486 ntBASIC17.12■□□□□ 0.33
LRRK2Q5S007 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
LRRK2Q5S007 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LRRK2Q5S007 C1orf229-201ENST00000623686 2258 ntBASIC17.12■□□□□ 0.33
LRRK2Q5S007 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRK2Q5S007 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRK2Q5S007 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.12■□□□□ 0.33
LRRK2Q5S007 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRRK2Q5S007 HLA-G-202ENST00000376815 851 ntBASIC17.12■□□□□ 0.33
LRRK2Q5S007 HLA-G-203ENST00000376818 1127 ntBASIC17.12■□□□□ 0.33
LRRK2Q5S007 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRK2Q5S007 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.12■□□□□ 0.33
LRRK2Q5S007 TSPY19P-201ENST00000418461 509 ntBASIC17.12■□□□□ 0.33
LRRK2Q5S007 TSPY18P-201ENST00000441642 509 ntBASIC17.12■□□□□ 0.33
LRRK2Q5S007 KRT18P58-201ENST00000527480 1120 ntBASIC17.12■□□□□ 0.33
LRRK2Q5S007 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.12■□□□□ 0.33
LRRK2Q5S007 AF228730.7-201ENST00000641842 219 ntBASIC17.12■□□□□ 0.33
LRRK2Q5S007 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
LRRK2Q5S007 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms