Protein–RNA interactions for Protein: Q5R1A4

Trdv2-2, T cell receptor delta variable 2-2 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-2Q5R1A4 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13□□□□□ -0.33
Trdv2-2Q5R1A4 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trdv2-2Q5R1A4 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trdv2-2Q5R1A4 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC13□□□□□ -0.33
Trdv2-2Q5R1A4 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trdv2-2Q5R1A4 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trdv2-2Q5R1A4 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trdv2-2Q5R1A4 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trdv2-2Q5R1A4 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC13□□□□□ -0.33
Trdv2-2Q5R1A4 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC13□□□□□ -0.33
Trdv2-2Q5R1A4 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC13□□□□□ -0.33
Trdv2-2Q5R1A4 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trdv2-2Q5R1A4 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trdv2-2Q5R1A4 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trdv2-2Q5R1A4 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trdv2-2Q5R1A4 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trdv2-2Q5R1A4 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trdv2-2Q5R1A4 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trdv2-2Q5R1A4 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trdv2-2Q5R1A4 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trdv2-2Q5R1A4 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC12.99□□□□□ -0.33
Trdv2-2Q5R1A4 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trdv2-2Q5R1A4 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Trdv2-2Q5R1A4 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.99□□□□□ -0.33
Trdv2-2Q5R1A4 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trdv2-2Q5R1A4 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trdv2-2Q5R1A4 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trdv2-2Q5R1A4 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trdv2-2Q5R1A4 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC12.99□□□□□ -0.33
Trdv2-2Q5R1A4 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trdv2-2Q5R1A4 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trdv2-2Q5R1A4 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trdv2-2Q5R1A4 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trdv2-2Q5R1A4 AV356131-201ENSMUST00000206201 750 ntBASIC12.99□□□□□ -0.33
Trdv2-2Q5R1A4 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trdv2-2Q5R1A4 Zfp783-201ENSMUST00000095946 670 ntBASIC12.99□□□□□ -0.33
Trdv2-2Q5R1A4 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trdv2-2Q5R1A4 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trdv2-2Q5R1A4 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trdv2-2Q5R1A4 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trdv2-2Q5R1A4 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trdv2-2Q5R1A4 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trdv2-2Q5R1A4 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trdv2-2Q5R1A4 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trdv2-2Q5R1A4 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trdv2-2Q5R1A4 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC12.99□□□□□ -0.33
Trdv2-2Q5R1A4 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trdv2-2Q5R1A4 Flg-201ENSMUST00000050758 1488 ntBASIC12.98□□□□□ -0.33
Trdv2-2Q5R1A4 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trdv2-2Q5R1A4 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trdv2-2Q5R1A4 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trdv2-2Q5R1A4 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trdv2-2Q5R1A4 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC12.98□□□□□ -0.33
Trdv2-2Q5R1A4 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC12.98□□□□□ -0.33
Trdv2-2Q5R1A4 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trdv2-2Q5R1A4 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trdv2-2Q5R1A4 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trdv2-2Q5R1A4 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trdv2-2Q5R1A4 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trdv2-2Q5R1A4 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trdv2-2Q5R1A4 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trdv2-2Q5R1A4 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trdv2-2Q5R1A4 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trdv2-2Q5R1A4 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trdv2-2Q5R1A4 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC12.97□□□□□ -0.33
Trdv2-2Q5R1A4 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trdv2-2Q5R1A4 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trdv2-2Q5R1A4 Gm16499-203ENSMUST00000204633 2177 ntBASIC12.97□□□□□ -0.33
Trdv2-2Q5R1A4 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trdv2-2Q5R1A4 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trdv2-2Q5R1A4 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trdv2-2Q5R1A4 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trdv2-2Q5R1A4 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trdv2-2Q5R1A4 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Trdv2-2Q5R1A4 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC12.97□□□□□ -0.33
Trdv2-2Q5R1A4 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trdv2-2Q5R1A4 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC12.97□□□□□ -0.33
Trdv2-2Q5R1A4 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC12.97□□□□□ -0.33
Trdv2-2Q5R1A4 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trdv2-2Q5R1A4 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trdv2-2Q5R1A4 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trdv2-2Q5R1A4 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trdv2-2Q5R1A4 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trdv2-2Q5R1A4 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trdv2-2Q5R1A4 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trdv2-2Q5R1A4 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trdv2-2Q5R1A4 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trdv2-2Q5R1A4 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trdv2-2Q5R1A4 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trdv2-2Q5R1A4 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trdv2-2Q5R1A4 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trdv2-2Q5R1A4 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trdv2-2Q5R1A4 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trdv2-2Q5R1A4 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.33
Trdv2-2Q5R1A4 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC12.96□□□□□ -0.33
Trdv2-2Q5R1A4 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trdv2-2Q5R1A4 Gm6211-202ENSMUST00000167849 925 ntBASIC12.96□□□□□ -0.33
Trdv2-2Q5R1A4 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC12.96□□□□□ -0.33
Trdv2-2Q5R1A4 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trdv2-2Q5R1A4 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms