Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Foxa1P35582 Gm7370-201ENSMUST00000219471 767 ntBASIC15.65■□□□□ 0.1
Foxa1P35582 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Foxa1P35582 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxa1P35582 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxa1P35582 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxa1P35582 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Foxa1P35582 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxa1P35582 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Foxa1P35582 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Foxa1P35582 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxa1P35582 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Foxa1P35582 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Foxa1P35582 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Foxa1P35582 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Foxa1P35582 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Foxa1P35582 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Foxa1P35582 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.64■□□□□ 0.09
Foxa1P35582 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.64■□□□□ 0.09
Foxa1P35582 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Foxa1P35582 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Foxa1P35582 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Foxa1P35582 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.64■□□□□ 0.09
Foxa1P35582 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Foxa1P35582 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Foxa1P35582 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Foxa1P35582 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Foxa1P35582 Gm6433-201ENSMUST00000118634 875 ntBASIC15.63■□□□□ 0.09
Foxa1P35582 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
Foxa1P35582 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.63■□□□□ 0.09
Foxa1P35582 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Foxa1P35582 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Foxa1P35582 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Foxa1P35582 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Foxa1P35582 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Foxa1P35582 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Foxa1P35582 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Foxa1P35582 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Foxa1P35582 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Foxa1P35582 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Foxa1P35582 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Foxa1P35582 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Foxa1P35582 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Foxa1P35582 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.62■□□□□ 0.09
Foxa1P35582 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Foxa1P35582 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Foxa1P35582 Gm16061-201ENSMUST00000122167 857 ntBASIC15.62■□□□□ 0.09
Foxa1P35582 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Foxa1P35582 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Foxa1P35582 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.62■□□□□ 0.09
Foxa1P35582 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Foxa1P35582 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Foxa1P35582 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Foxa1P35582 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Foxa1P35582 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Foxa1P35582 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Foxa1P35582 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Foxa1P35582 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Foxa1P35582 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Foxa1P35582 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Foxa1P35582 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Foxa1P35582 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.61■□□□□ 0.09
Foxa1P35582 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Foxa1P35582 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Foxa1P35582 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.61■□□□□ 0.09
Foxa1P35582 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Foxa1P35582 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.61■□□□□ 0.09
Foxa1P35582 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.61■□□□□ 0.09
Foxa1P35582 Gm18959-201ENSMUST00000208954 655 ntBASIC15.61■□□□□ 0.09
Foxa1P35582 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.61■□□□□ 0.09
Foxa1P35582 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
Foxa1P35582 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Foxa1P35582 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Foxa1P35582 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Foxa1P35582 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Foxa1P35582 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Foxa1P35582 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Foxa1P35582 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Foxa1P35582 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
Foxa1P35582 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Foxa1P35582 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Foxa1P35582 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Foxa1P35582 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Foxa1P35582 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Foxa1P35582 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.6■□□□□ 0.09
Foxa1P35582 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.6■□□□□ 0.09
Foxa1P35582 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Foxa1P35582 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Foxa1P35582 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.6■□□□□ 0.09
Foxa1P35582 Gm13474-201ENSMUST00000122466 815 ntBASIC15.6■□□□□ 0.09
Foxa1P35582 Mir5130-201ENSMUST00000175160 84 ntBASIC15.6■□□□□ 0.09
Foxa1P35582 Mir7071-201ENSMUST00000184847 69 ntBASIC15.6■□□□□ 0.09
Foxa1P35582 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Foxa1P35582 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Foxa1P35582 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.6■□□□□ 0.09
Foxa1P35582 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Foxa1P35582 Gm9987-201ENSMUST00000069768 567 ntBASIC15.6■□□□□ 0.09
Foxa1P35582 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Foxa1P35582 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.6■□□□□ 0.09
Foxa1P35582 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms