Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LCMT2O60294 PRORSD1P-201ENST00000295112 541 ntBASIC18.83■□□□□ 0.6
LCMT2O60294 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LCMT2O60294 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LCMT2O60294 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.83■□□□□ 0.6
LCMT2O60294 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
LCMT2O60294 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LCMT2O60294 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
LCMT2O60294 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.83■□□□□ 0.6
LCMT2O60294 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.83■□□□□ 0.6
LCMT2O60294 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.83■□□□□ 0.6
LCMT2O60294 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LCMT2O60294 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LCMT2O60294 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.83■□□□□ 0.6
LCMT2O60294 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.83■□□□□ 0.6
LCMT2O60294 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LCMT2O60294 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
LCMT2O60294 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LCMT2O60294 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LCMT2O60294 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LCMT2O60294 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LCMT2O60294 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LCMT2O60294 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LCMT2O60294 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.83■□□□□ 0.6
LCMT2O60294 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LCMT2O60294 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LCMT2O60294 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LCMT2O60294 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
LCMT2O60294 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LCMT2O60294 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.82■□□□□ 0.6
LCMT2O60294 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.82■□□□□ 0.6
LCMT2O60294 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LCMT2O60294 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LCMT2O60294 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
LCMT2O60294 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LCMT2O60294 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LCMT2O60294 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.82■□□□□ 0.6
LCMT2O60294 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.82■□□□□ 0.6
LCMT2O60294 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.82■□□□□ 0.6
LCMT2O60294 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.82■□□□□ 0.6
LCMT2O60294 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.82■□□□□ 0.6
LCMT2O60294 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
LCMT2O60294 PRKY-204ENST00000533551 1019 ntBASIC18.82■□□□□ 0.6
LCMT2O60294 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LCMT2O60294 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
LCMT2O60294 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
LCMT2O60294 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.82■□□□□ 0.6
LCMT2O60294 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
LCMT2O60294 AP006587.1-201ENST00000534129 1502 ntBASIC18.82■□□□□ 0.6
LCMT2O60294 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
LCMT2O60294 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LCMT2O60294 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
LCMT2O60294 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.82■□□□□ 0.6
LCMT2O60294 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
LCMT2O60294 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LCMT2O60294 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LCMT2O60294 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LCMT2O60294 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
LCMT2O60294 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LCMT2O60294 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
LCMT2O60294 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.81■□□□□ 0.6
LCMT2O60294 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LCMT2O60294 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LCMT2O60294 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LCMT2O60294 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LCMT2O60294 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.81■□□□□ 0.6
LCMT2O60294 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
LCMT2O60294 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LCMT2O60294 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.81■□□□□ 0.6
LCMT2O60294 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.81■□□□□ 0.6
LCMT2O60294 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
LCMT2O60294 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
LCMT2O60294 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
LCMT2O60294 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LCMT2O60294 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LCMT2O60294 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LCMT2O60294 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
LCMT2O60294 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
LCMT2O60294 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LCMT2O60294 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
LCMT2O60294 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LCMT2O60294 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LCMT2O60294 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LCMT2O60294 AL158211.5-201ENST00000623583 2518 ntBASIC18.8■□□□□ 0.6
LCMT2O60294 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LCMT2O60294 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LCMT2O60294 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LCMT2O60294 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.8■□□□□ 0.6
LCMT2O60294 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LCMT2O60294 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LCMT2O60294 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.8■□□□□ 0.6
LCMT2O60294 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.8■□□□□ 0.6
LCMT2O60294 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LCMT2O60294 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LCMT2O60294 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
LCMT2O60294 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LCMT2O60294 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.8■□□□□ 0.6
LCMT2O60294 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LCMT2O60294 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
LCMT2O60294 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms