Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pde6dO55057 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pde6dO55057 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pde6dO55057 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pde6dO55057 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pde6dO55057 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.27
Pde6dO55057 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Pde6dO55057 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6dO55057 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pde6dO55057 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.39□□□□□ -0.27
Pde6dO55057 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6dO55057 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6dO55057 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6dO55057 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6dO55057 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6dO55057 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6dO55057 Gm43173-201ENSMUST00000202246 593 ntBASIC13.39□□□□□ -0.27
Pde6dO55057 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC13.39□□□□□ -0.27
Pde6dO55057 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6dO55057 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6dO55057 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6dO55057 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6dO55057 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6dO55057 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Pde6dO55057 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pde6dO55057 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6dO55057 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6dO55057 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6dO55057 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6dO55057 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6dO55057 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6dO55057 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6dO55057 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6dO55057 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6dO55057 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Pde6dO55057 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6dO55057 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6dO55057 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pde6dO55057 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Pde6dO55057 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6dO55057 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.38□□□□□ -0.27
Pde6dO55057 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6dO55057 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Pde6dO55057 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6dO55057 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6dO55057 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6dO55057 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6dO55057 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6dO55057 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
Pde6dO55057 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6dO55057 Gm8493-201ENSMUST00000196881 489 ntBASIC13.38□□□□□ -0.27
Pde6dO55057 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6dO55057 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC13.38□□□□□ -0.27
Pde6dO55057 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6dO55057 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6dO55057 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Pde6dO55057 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6dO55057 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6dO55057 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6dO55057 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Pde6dO55057 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6dO55057 AC131586.2-201ENSMUST00000228370 1512 ntBASIC13.38□□□□□ -0.27
Pde6dO55057 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.38□□□□□ -0.27
Pde6dO55057 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6dO55057 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pde6dO55057 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.38□□□□□ -0.27
Pde6dO55057 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pde6dO55057 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pde6dO55057 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pde6dO55057 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pde6dO55057 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pde6dO55057 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pde6dO55057 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pde6dO55057 AC108858.1-201ENSMUST00000228461 1498 ntBASIC13.37□□□□□ -0.27
Pde6dO55057 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Pde6dO55057 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pde6dO55057 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC13.37□□□□□ -0.27
Pde6dO55057 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pde6dO55057 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Pde6dO55057 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pde6dO55057 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.37□□□□□ -0.27
Pde6dO55057 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pde6dO55057 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pde6dO55057 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pde6dO55057 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
Pde6dO55057 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Pde6dO55057 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pde6dO55057 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pde6dO55057 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pde6dO55057 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pde6dO55057 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pde6dO55057 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pde6dO55057 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.37□□□□□ -0.27
Pde6dO55057 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pde6dO55057 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pde6dO55057 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pde6dO55057 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pde6dO55057 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pde6dO55057 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pde6dO55057 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms