Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.55■□□□□ 0.56
CLDN4O14493 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN4O14493 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.55■□□□□ 0.56
CLDN4O14493 AL023875.1-201ENST00000640777 796 ntBASIC18.55■□□□□ 0.56
CLDN4O14493 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN4O14493 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CLDN4O14493 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN4O14493 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.55■□□□□ 0.56
CLDN4O14493 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN4O14493 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN4O14493 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.55■□□□□ 0.56
CLDN4O14493 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN4O14493 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN4O14493 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.54■□□□□ 0.56
CLDN4O14493 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN4O14493 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CLDN4O14493 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN4O14493 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.54■□□□□ 0.56
CLDN4O14493 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN4O14493 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN4O14493 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.54■□□□□ 0.56
CLDN4O14493 TMEM179-206ENST00000616017 1645 ntBASIC18.54■□□□□ 0.56
CLDN4O14493 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN4O14493 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN4O14493 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CLDN4O14493 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.54■□□□□ 0.56
CLDN4O14493 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.54■□□□□ 0.56
CLDN4O14493 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
CLDN4O14493 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.54■□□□□ 0.56
CLDN4O14493 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.54■□□□□ 0.56
CLDN4O14493 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN4O14493 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN4O14493 AC112907.3-201ENST00000577781 2400 ntBASIC18.54■□□□□ 0.56
CLDN4O14493 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.54■□□□□ 0.56
CLDN4O14493 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN4O14493 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN4O14493 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
CLDN4O14493 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
CLDN4O14493 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.54■□□□□ 0.56
CLDN4O14493 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN4O14493 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.53■□□□□ 0.56
CLDN4O14493 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN4O14493 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.53■□□□□ 0.56
CLDN4O14493 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.53■□□□□ 0.56
CLDN4O14493 NBPF21P-201ENST00000425093 1451 ntBASIC18.53■□□□□ 0.56
CLDN4O14493 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CLDN4O14493 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN4O14493 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.53■□□□□ 0.56
CLDN4O14493 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN4O14493 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.53■□□□□ 0.56
CLDN4O14493 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN4O14493 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN4O14493 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.53■□□□□ 0.56
CLDN4O14493 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.53■□□□□ 0.56
CLDN4O14493 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.53■□□□□ 0.56
CLDN4O14493 RPPH1-201ENST00000516869 333 ntBASIC18.53■□□□□ 0.56
CLDN4O14493 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.53■□□□□ 0.56
CLDN4O14493 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN4O14493 AC142381.4-202ENST00000563973 229 ntBASIC18.53■□□□□ 0.56
CLDN4O14493 AC004264.1-201ENST00000608354 794 ntBASIC18.53■□□□□ 0.56
CLDN4O14493 FAM197Y4-202ENST00000622692 608 ntBASIC18.53■□□□□ 0.56
CLDN4O14493 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.53■□□□□ 0.56
CLDN4O14493 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN4O14493 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN4O14493 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CLDN4O14493 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN4O14493 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
CLDN4O14493 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CLDN4O14493 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN4O14493 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CLDN4O14493 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN4O14493 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN4O14493 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.52■□□□□ 0.56
CLDN4O14493 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN4O14493 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN4O14493 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.52■□□□□ 0.56
CLDN4O14493 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN4O14493 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CLDN4O14493 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN4O14493 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CLDN4O14493 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN4O14493 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CLDN4O14493 KRASP1-201ENST00000407852 552 ntBASIC18.52■□□□□ 0.56
CLDN4O14493 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN4O14493 AC133681.1-201ENST00000465482 601 ntBASIC18.52■□□□□ 0.56
CLDN4O14493 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.52■□□□□ 0.56
CLDN4O14493 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.52■□□□□ 0.56
CLDN4O14493 AC110285.5-201ENST00000611501 352 ntBASIC18.52■□□□□ 0.56
CLDN4O14493 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.52■□□□□ 0.56
CLDN4O14493 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CLDN4O14493 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CLDN4O14493 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CLDN4O14493 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CLDN4O14493 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CLDN4O14493 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.52■□□□□ 0.55
CLDN4O14493 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CLDN4O14493 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CLDN4O14493 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN4O14493 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.51■□□□□ 0.55
CLDN4O14493 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms