Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 CDY17P-201ENST00000414121 1282 ntBASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 CDY8P-201ENST00000428380 1279 ntBASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 AL663074.2-201ENST00000440621 479 ntBASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 RBPJP7-201ENST00000442803 1447 ntBASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 CDY20P-201ENST00000447528 1279 ntBASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 RBPJP5-201ENST00000449433 1447 ntBASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 AC068491.1-201ENST00000449539 1241 ntBASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 AC098583.1-201ENST00000480875 255 ntBASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 AC009879.1-201ENST00000520029 839 ntBASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 MIR3154-201ENST00000577829 84 ntBASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 AP005119.1-201ENST00000580956 292 ntBASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 AL356608.1-201ENST00000610034 820 ntBASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 AC004801.6-201ENST00000616571 978 ntBASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RHBDD3Q9Y3P4 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 AC114774.1-201ENST00000507410 1770 ntBASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 AC006206.1-201ENST00000544842 3387 ntBASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 AL354854.1-201ENST00000455940 1363 ntBASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 AC144833.1-201ENST00000567953 4089 ntBASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 AC092451.3-201ENST00000625067 1343 ntBASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 RN7SKP78-201ENST00000364711 318 ntBASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 SNORA51.9-201ENST00000384295 124 ntBASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 MIR130B-202ENST00000385018 82 ntBASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 PEX12P1-201ENST00000400284 1048 ntBASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 AC002524.1-201ENST00000411687 547 ntBASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 AC096775.1-201ENST00000437724 448 ntBASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 AC097463.1-201ENST00000447288 481 ntBASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 YRDCP3-201ENST00000456507 480 ntBASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 AC004129.2-201ENST00000457229 287 ntBASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 RN7SL269P-201ENST00000467795 305 ntBASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 AC023245.1-201ENST00000468501 517 ntBASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 AC098847.1-201ENST00000473094 348 ntBASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 RPL9P15-201ENST00000491096 532 ntBASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 SNORA70.11-201ENST00000515987 138 ntBASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 SNORA70.13-201ENST00000516116 138 ntBASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 MIR2117-201ENST00000516780 80 ntBASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 OR4A42P-201ENST00000531397 938 ntBASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 AL133481.2-203ENST00000607558 139 ntBASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 AL021918.2-201ENST00000613415 194 ntBASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 RNA5SP439-201ENST00000617595 124 ntBASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 AP003072.5-201ENST00000623872 773 ntBASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 CASC19-274ENST00000642018 970 ntBASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 AC012254.3-201ENST00000591183 2117 ntBASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
RHBDD3Q9Y3P4 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
RHBDD3Q9Y3P4 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
RHBDD3Q9Y3P4 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
RHBDD3Q9Y3P4 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.6
RHBDD3Q9Y3P4 MFSD8-239ENST00000641590 2479 ntBASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms