Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 RBMY2QP-201ENST00000429799 1147 ntBASIC7.12□□□□□ -1.27
SCN11AQ9UI33 RPS3AP38-201ENST00000435889 763 ntBASIC7.12□□□□□ -1.27
SCN11AQ9UI33 RPL21P133-201ENST00000443666 476 ntBASIC7.12□□□□□ -1.27
SCN11AQ9UI33 RPL15P21-201ENST00000495592 567 ntBASIC7.12□□□□□ -1.27
SCN11AQ9UI33 RN7SL591P-201ENST00000496150 292 ntBASIC7.12□□□□□ -1.27
SCN11AQ9UI33 RNA5SP228-201ENST00000516232 133 ntBASIC7.12□□□□□ -1.27
SCN11AQ9UI33 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC7.12□□□□□ -1.27
SCN11AQ9UI33 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC7.12□□□□□ -1.27
SCN11AQ9UI33 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC7.12□□□□□ -1.27
SCN11AQ9UI33 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC7.12□□□□□ -1.27
SCN11AQ9UI33 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC7.12□□□□□ -1.27
SCN11AQ9UI33 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC7.12□□□□□ -1.27
SCN11AQ9UI33 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC7.12□□□□□ -1.27
SCN11AQ9UI33 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC7.12□□□□□ -1.27
SCN11AQ9UI33 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SCN11AQ9UI33 AL445528.2-201ENST00000620582 470 ntBASIC7.12□□□□□ -1.27
SCN11AQ9UI33 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC7.12□□□□□ -1.27
SCN11AQ9UI33 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC7.12□□□□□ -1.27
SCN11AQ9UI33 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SCN11AQ9UI33 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC7.12□□□□□ -1.27
SCN11AQ9UI33 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
SCN11AQ9UI33 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SCN11AQ9UI33 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SCN11AQ9UI33 LPP-208ENST00000448637 5835 ntTSL 5 BASIC7.12□□□□□ -1.27
SCN11AQ9UI33 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC7.12□□□□□ -1.27
SCN11AQ9UI33 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SCN11AQ9UI33 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
SCN11AQ9UI33 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
SCN11AQ9UI33 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
SCN11AQ9UI33 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
SCN11AQ9UI33 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SCN11AQ9UI33 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC7.11□□□□□ -1.27
SCN11AQ9UI33 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC7.11□□□□□ -1.27
SCN11AQ9UI33 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SCN11AQ9UI33 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC7.11□□□□□ -1.27
SCN11AQ9UI33 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
SCN11AQ9UI33 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC7.11□□□□□ -1.27
SCN11AQ9UI33 AZGP1P2-201ENST00000454506 345 ntBASIC7.11□□□□□ -1.27
SCN11AQ9UI33 AC108161.1-201ENST00000461060 402 ntBASIC7.11□□□□□ -1.27
SCN11AQ9UI33 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC7.11□□□□□ -1.27
SCN11AQ9UI33 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC7.11□□□□□ -1.27
SCN11AQ9UI33 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.11□□□□□ -1.27
SCN11AQ9UI33 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC7.11□□□□□ -1.27
SCN11AQ9UI33 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC7.11□□□□□ -1.27
SCN11AQ9UI33 TEX41-254ENST00000626394 423 ntTSL 5 BASIC7.11□□□□□ -1.27
SCN11AQ9UI33 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
SCN11AQ9UI33 LRRC37A16P-202ENST00000586022 3725 ntBASIC7.11□□□□□ -1.27
SCN11AQ9UI33 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC7.11□□□□□ -1.27
SCN11AQ9UI33 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SCN11AQ9UI33 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC7.11□□□□□ -1.27
SCN11AQ9UI33 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SCN11AQ9UI33 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
SCN11AQ9UI33 EEF1A1P33-201ENST00000554413 1362 ntBASIC7.11□□□□□ -1.27
SCN11AQ9UI33 ATP5A1P4-201ENST00000556888 1605 ntBASIC7.11□□□□□ -1.27
SCN11AQ9UI33 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SCN11AQ9UI33 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SCN11AQ9UI33 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
SCN11AQ9UI33 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC7.11□□□□□ -1.27
SCN11AQ9UI33 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SCN11AQ9UI33 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC7.1□□□□□ -1.27
SCN11AQ9UI33 RN7SKP6-201ENST00000364795 319 ntBASIC7.1□□□□□ -1.27
SCN11AQ9UI33 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC7.1□□□□□ -1.27
SCN11AQ9UI33 RPL12P3-201ENST00000440080 396 ntBASIC7.1□□□□□ -1.27
SCN11AQ9UI33 PDCL3P4-201ENST00000489621 720 ntBASIC7.1□□□□□ -1.27
SCN11AQ9UI33 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC7.1□□□□□ -1.27
SCN11AQ9UI33 OR11H3P-201ENST00000554547 982 ntBASIC7.1□□□□□ -1.27
SCN11AQ9UI33 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SCN11AQ9UI33 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC7.1□□□□□ -1.27
SCN11AQ9UI33 AC135068.5-201ENST00000624197 983 ntBASIC7.1□□□□□ -1.27
SCN11AQ9UI33 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC7.1□□□□□ -1.27
SCN11AQ9UI33 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.1□□□□□ -1.27
SCN11AQ9UI33 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
SCN11AQ9UI33 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
SCN11AQ9UI33 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC7.1□□□□□ -1.27
SCN11AQ9UI33 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SCN11AQ9UI33 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SCN11AQ9UI33 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
SCN11AQ9UI33 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SCN11AQ9UI33 AC079777.1-201ENST00000623836 1953 ntBASIC7.1□□□□□ -1.27
SCN11AQ9UI33 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC7.1□□□□□ -1.27
SCN11AQ9UI33 RNU1-146P-201ENST00000364015 165 ntBASIC7.1□□□□□ -1.27
SCN11AQ9UI33 RNU1-59P-201ENST00000364829 162 ntBASIC7.1□□□□□ -1.27
SCN11AQ9UI33 RNU1-136P-201ENST00000384181 164 ntBASIC7.1□□□□□ -1.27
SCN11AQ9UI33 SNORA11-201ENST00000408789 128 ntBASIC7.1□□□□□ -1.27
SCN11AQ9UI33 RPS26P38-201ENST00000414476 348 ntBASIC7.1□□□□□ -1.27
SCN11AQ9UI33 OR10T1P-201ENST00000424327 947 ntBASIC7.1□□□□□ -1.27
SCN11AQ9UI33 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC7.1□□□□□ -1.27
SCN11AQ9UI33 AC079841.1-201ENST00000481228 950 ntBASIC7.1□□□□□ -1.27
SCN11AQ9UI33 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC7.1□□□□□ -1.27
SCN11AQ9UI33 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC7.1□□□□□ -1.27
SCN11AQ9UI33 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC7.1□□□□□ -1.27
SCN11AQ9UI33 MIR6820-201ENST00000611508 62 ntBASIC7.1□□□□□ -1.27
SCN11AQ9UI33 U1.25-201ENST00000614085 162 ntBASIC7.1□□□□□ -1.27
SCN11AQ9UI33 U1.34-201ENST00000618578 162 ntBASIC7.1□□□□□ -1.27
SCN11AQ9UI33 U1.31-201ENST00000620022 160 ntBASIC7.1□□□□□ -1.27
SCN11AQ9UI33 AP001784.1-201ENST00000624107 428 ntBASIC7.1□□□□□ -1.27
SCN11AQ9UI33 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC7.1□□□□□ -1.27
SCN11AQ9UI33 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
SCN11AQ9UI33 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC7.1□□□□□ -1.27
SCN11AQ9UI33 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms