Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 BX322635.1-201ENST00000605804 496 ntBASIC6.01□□□□□ -1.45
PCDH9Q9HC56 NANOGP3-201ENST00000605855 286 ntBASIC6.01□□□□□ -1.45
PCDH9Q9HC56 AC007620.3-201ENST00000608131 497 ntBASIC6.01□□□□□ -1.45
PCDH9Q9HC56 MIR6809-201ENST00000612189 116 ntBASIC6.01□□□□□ -1.45
PCDH9Q9HC56 MIR6071-201ENST00000616741 78 ntBASIC6.01□□□□□ -1.45
PCDH9Q9HC56 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.01□□□□□ -1.45
PCDH9Q9HC56 AC140134.1-201ENST00000511830 3544 ntBASIC6.01□□□□□ -1.45
PCDH9Q9HC56 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.01□□□□□ -1.45
PCDH9Q9HC56 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
PCDH9Q9HC56 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6□□□□□ -1.45
PCDH9Q9HC56 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6□□□□□ -1.45
PCDH9Q9HC56 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PCDH9Q9HC56 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PCDH9Q9HC56 AC004656.1-201ENST00000568479 4951 ntBASIC6□□□□□ -1.45
PCDH9Q9HC56 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PCDH9Q9HC56 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC6□□□□□ -1.45
PCDH9Q9HC56 OR5T3-201ENST00000303059 1023 ntBASIC6□□□□□ -1.45
PCDH9Q9HC56 SELENOWP1-201ENST00000322792 252 ntBASIC6□□□□□ -1.45
PCDH9Q9HC56 OR7E156P-201ENST00000400303 464 ntBASIC6□□□□□ -1.45
PCDH9Q9HC56 AL158827.1-201ENST00000416300 391 ntBASIC6□□□□□ -1.45
PCDH9Q9HC56 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6□□□□□ -1.45
PCDH9Q9HC56 VN1R21P-201ENST00000426703 765 ntBASIC6□□□□□ -1.45
PCDH9Q9HC56 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6□□□□□ -1.45
PCDH9Q9HC56 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6□□□□□ -1.45
PCDH9Q9HC56 TRIM60P13-201ENST00000432350 1283 ntBASIC6□□□□□ -1.45
PCDH9Q9HC56 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6□□□□□ -1.45
PCDH9Q9HC56 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC6□□□□□ -1.45
PCDH9Q9HC56 MTND3P4-201ENST00000453537 303 ntBASIC6□□□□□ -1.45
PCDH9Q9HC56 GEMIN2P1-201ENST00000454246 752 ntBASIC6□□□□□ -1.45
PCDH9Q9HC56 AL157777.1-201ENST00000468100 304 ntBASIC6□□□□□ -1.45
PCDH9Q9HC56 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6□□□□□ -1.45
PCDH9Q9HC56 RPS26P24-201ENST00000497656 331 ntBASIC6□□□□□ -1.45
PCDH9Q9HC56 AC105384.2-201ENST00000508433 640 ntBASIC6□□□□□ -1.45
PCDH9Q9HC56 GLUD1P3-202ENST00000508551 200 ntBASIC6□□□□□ -1.45
PCDH9Q9HC56 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6□□□□□ -1.45
PCDH9Q9HC56 SCARNA18.1-201ENST00000516330 83 ntBASIC6□□□□□ -1.45
PCDH9Q9HC56 RN7SKP70-201ENST00000516655 271 ntBASIC6□□□□□ -1.45
PCDH9Q9HC56 AC021733.2-201ENST00000518830 497 ntBASIC6□□□□□ -1.45
PCDH9Q9HC56 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6□□□□□ -1.45
PCDH9Q9HC56 AC084824.2-201ENST00000548906 345 ntBASIC6□□□□□ -1.45
PCDH9Q9HC56 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6□□□□□ -1.45
PCDH9Q9HC56 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6□□□□□ -1.45
PCDH9Q9HC56 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6□□□□□ -1.45
PCDH9Q9HC56 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6□□□□□ -1.45
PCDH9Q9HC56 AL499605.1-201ENST00000604628 403 ntBASIC6□□□□□ -1.45
PCDH9Q9HC56 AC145423.1-201ENST00000605712 336 ntBASIC6□□□□□ -1.45
PCDH9Q9HC56 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6□□□□□ -1.45
PCDH9Q9HC56 AL023583.1-201ENST00000607518 1143 ntBASIC6□□□□□ -1.45
PCDH9Q9HC56 AL136131.3-201ENST00000607600 188 ntBASIC6□□□□□ -1.45
PCDH9Q9HC56 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6□□□□□ -1.45
PCDH9Q9HC56 AC024884.1-201ENST00000620583 399 ntBASIC6□□□□□ -1.45
PCDH9Q9HC56 AC005618.4-201ENST00000625053 554 ntBASIC6□□□□□ -1.45
PCDH9Q9HC56 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6□□□□□ -1.45
PCDH9Q9HC56 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PCDH9Q9HC56 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PCDH9Q9HC56 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6□□□□□ -1.45
PCDH9Q9HC56 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6□□□□□ -1.45
PCDH9Q9HC56 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6□□□□□ -1.45
PCDH9Q9HC56 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6□□□□□ -1.45
PCDH9Q9HC56 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6□□□□□ -1.45
PCDH9Q9HC56 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PCDH9Q9HC56 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6□□□□□ -1.45
PCDH9Q9HC56 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
PCDH9Q9HC56 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PCDH9Q9HC56 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
PCDH9Q9HC56 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PCDH9Q9HC56 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
PCDH9Q9HC56 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
PCDH9Q9HC56 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
PCDH9Q9HC56 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.99□□□□□ -1.45
PCDH9Q9HC56 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.99□□□□□ -1.45
PCDH9Q9HC56 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
PCDH9Q9HC56 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PCDH9Q9HC56 AF287957.1-201ENST00000607368 1595 ntBASIC5.99□□□□□ -1.45
PCDH9Q9HC56 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PCDH9Q9HC56 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PCDH9Q9HC56 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.99□□□□□ -1.45
PCDH9Q9HC56 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.99□□□□□ -1.45
PCDH9Q9HC56 RNGTTP1-201ENST00000420965 728 ntBASIC5.99□□□□□ -1.45
PCDH9Q9HC56 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.99□□□□□ -1.45
PCDH9Q9HC56 TUBB4BP6-201ENST00000437576 479 ntBASIC5.99□□□□□ -1.45
PCDH9Q9HC56 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.99□□□□□ -1.45
PCDH9Q9HC56 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.99□□□□□ -1.45
PCDH9Q9HC56 AC025458.1-201ENST00000506046 166 ntBASIC5.99□□□□□ -1.45
PCDH9Q9HC56 SETP21-201ENST00000514799 892 ntBASIC5.99□□□□□ -1.45
PCDH9Q9HC56 WBP1LP3-201ENST00000523033 208 ntBASIC5.99□□□□□ -1.45
PCDH9Q9HC56 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.99□□□□□ -1.45
PCDH9Q9HC56 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.99□□□□□ -1.45
PCDH9Q9HC56 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.99□□□□□ -1.45
PCDH9Q9HC56 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.99□□□□□ -1.45
PCDH9Q9HC56 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.99□□□□□ -1.45
PCDH9Q9HC56 LINC00556-201ENST00000569603 412 ntBASIC5.99□□□□□ -1.45
PCDH9Q9HC56 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.99□□□□□ -1.45
PCDH9Q9HC56 TMF1P1-201ENST00000576058 373 ntBASIC5.99□□□□□ -1.45
PCDH9Q9HC56 MIR6793-201ENST00000612376 63 ntBASIC5.99□□□□□ -1.45
PCDH9Q9HC56 AL139099.4-201ENST00000614802 114 ntBASIC5.99□□□□□ -1.45
PCDH9Q9HC56 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.99□□□□□ -1.45
PCDH9Q9HC56 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
PCDH9Q9HC56 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.99□□□□□ -1.45
PCDH9Q9HC56 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms