Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC8.51□□□□□ -1.05
SCAPERQ9BY12 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
SCAPERQ9BY12 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SCAPERQ9BY12 ZNF101P1-201ENST00000435701 1720 ntBASIC8.51□□□□□ -1.05
SCAPERQ9BY12 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
SCAPERQ9BY12 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC8.51□□□□□ -1.05
SCAPERQ9BY12 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
SCAPERQ9BY12 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
SCAPERQ9BY12 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SCAPERQ9BY12 AL731534.1-201ENST00000434711 269 ntBASIC8.51□□□□□ -1.05
SCAPERQ9BY12 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC8.51□□□□□ -1.05
SCAPERQ9BY12 AC083982.1-201ENST00000485679 344 ntBASIC8.51□□□□□ -1.05
SCAPERQ9BY12 IGLV2-34-201ENST00000490007 283 ntBASIC8.51□□□□□ -1.05
SCAPERQ9BY12 CEACAMP10-202ENST00000495431 496 ntBASIC8.51□□□□□ -1.05
SCAPERQ9BY12 AC105233.1-201ENST00000498840 781 ntBASIC8.51□□□□□ -1.05
SCAPERQ9BY12 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC8.51□□□□□ -1.05
SCAPERQ9BY12 RNU6-941P-201ENST00000516346 108 ntBASIC8.51□□□□□ -1.05
SCAPERQ9BY12 IGLV3-24-201ENST00000517477 197 ntBASIC8.51□□□□□ -1.05
SCAPERQ9BY12 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC8.51□□□□□ -1.05
SCAPERQ9BY12 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC8.51□□□□□ -1.05
SCAPERQ9BY12 AC067852.5-201ENST00000589299 310 ntBASIC8.51□□□□□ -1.05
SCAPERQ9BY12 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC8.51□□□□□ -1.05
SCAPERQ9BY12 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC8.51□□□□□ -1.05
SCAPERQ9BY12 AC090527.3-201ENST00000619041 548 ntBASIC8.51□□□□□ -1.05
SCAPERQ9BY12 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
SCAPERQ9BY12 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC8.51□□□□□ -1.05
SCAPERQ9BY12 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SCAPERQ9BY12 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC8.51□□□□□ -1.05
SCAPERQ9BY12 AC018765.1-201ENST00000623357 3446 ntBASIC8.51□□□□□ -1.05
SCAPERQ9BY12 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SCAPERQ9BY12 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC8.51□□□□□ -1.05
SCAPERQ9BY12 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
SCAPERQ9BY12 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
SCAPERQ9BY12 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC8.51□□□□□ -1.05
SCAPERQ9BY12 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC8.5□□□□□ -1.05
SCAPERQ9BY12 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SCAPERQ9BY12 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SCAPERQ9BY12 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
SCAPERQ9BY12 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
SCAPERQ9BY12 RNU1-43P-201ENST00000365052 165 ntBASIC8.5□□□□□ -1.05
SCAPERQ9BY12 SNORA67-201ENST00000384423 137 ntBASIC8.5□□□□□ -1.05
SCAPERQ9BY12 CYB5AP4-201ENST00000396692 399 ntBASIC8.5□□□□□ -1.05
SCAPERQ9BY12 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC8.5□□□□□ -1.05
SCAPERQ9BY12 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC8.5□□□□□ -1.05
SCAPERQ9BY12 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC8.5□□□□□ -1.05
SCAPERQ9BY12 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC8.5□□□□□ -1.05
SCAPERQ9BY12 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC8.5□□□□□ -1.05
SCAPERQ9BY12 AC090114.3-201ENST00000479267 829 ntBASIC8.5□□□□□ -1.05
SCAPERQ9BY12 RN7SKP99-201ENST00000517028 307 ntBASIC8.5□□□□□ -1.05
SCAPERQ9BY12 AC013701.1-201ENST00000522657 465 ntBASIC8.5□□□□□ -1.05
SCAPERQ9BY12 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC8.5□□□□□ -1.05
SCAPERQ9BY12 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC8.5□□□□□ -1.05
SCAPERQ9BY12 AL731566.2-201ENST00000618971 317 ntBASIC8.5□□□□□ -1.05
SCAPERQ9BY12 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC8.5□□□□□ -1.05
SCAPERQ9BY12 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
SCAPERQ9BY12 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC8.5□□□□□ -1.05
SCAPERQ9BY12 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
SCAPERQ9BY12 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC8.5□□□□□ -1.05
SCAPERQ9BY12 NBPF8-201ENST00000583271 5330 ntBASIC8.5□□□□□ -1.05
SCAPERQ9BY12 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC8.49□□□□□ -1.05
SCAPERQ9BY12 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
SCAPERQ9BY12 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
SCAPERQ9BY12 ABCA11P-202ENST00000504019 2110 ntBASIC8.49□□□□□ -1.05
SCAPERQ9BY12 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
SCAPERQ9BY12 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC8.49□□□□□ -1.05
SCAPERQ9BY12 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
SCAPERQ9BY12 RN7SKP104-201ENST00000362605 328 ntBASIC8.49□□□□□ -1.05
SCAPERQ9BY12 RNU6ATAC7P-201ENST00000408111 127 ntBASIC8.49□□□□□ -1.05
SCAPERQ9BY12 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC8.49□□□□□ -1.05
SCAPERQ9BY12 RBMY2QP-201ENST00000429799 1147 ntBASIC8.49□□□□□ -1.05
SCAPERQ9BY12 AL049745.1-201ENST00000433953 286 ntBASIC8.49□□□□□ -1.05
SCAPERQ9BY12 AC092106.1-201ENST00000444291 373 ntBASIC8.49□□□□□ -1.05
SCAPERQ9BY12 AC105399.1-202ENST00000447303 205 ntBASIC8.49□□□□□ -1.05
SCAPERQ9BY12 RN7SL591P-201ENST00000496150 292 ntBASIC8.49□□□□□ -1.05
SCAPERQ9BY12 OR5AZ1P-201ENST00000527448 943 ntBASIC8.49□□□□□ -1.05
SCAPERQ9BY12 AC137768.1-201ENST00000549998 553 ntBASIC8.49□□□□□ -1.05
SCAPERQ9BY12 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC8.49□□□□□ -1.05
SCAPERQ9BY12 AC087783.2-201ENST00000605070 562 ntBASIC8.49□□□□□ -1.05
SCAPERQ9BY12 AC109583.2-201ENST00000617367 129 ntBASIC8.49□□□□□ -1.05
SCAPERQ9BY12 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SCAPERQ9BY12 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC8.49□□□□□ -1.05
SCAPERQ9BY12 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC8.49□□□□□ -1.05
SCAPERQ9BY12 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
SCAPERQ9BY12 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC8.49□□□□□ -1.05
SCAPERQ9BY12 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SCAPERQ9BY12 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SCAPERQ9BY12 WBP11P1-201ENST00000562560 1931 ntBASIC8.49□□□□□ -1.05
SCAPERQ9BY12 AL121768.1-201ENST00000613917 2544 ntBASIC8.48□□□□□ -1.05
SCAPERQ9BY12 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SCAPERQ9BY12 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
SCAPERQ9BY12 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
SCAPERQ9BY12 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC8.48□□□□□ -1.05
SCAPERQ9BY12 AL035690.1-201ENST00000490892 383 ntBASIC8.48□□□□□ -1.05
SCAPERQ9BY12 DUTP1-201ENST00000493631 470 ntBASIC8.48□□□□□ -1.05
SCAPERQ9BY12 AC015864.1-201ENST00000496512 544 ntBASIC8.48□□□□□ -1.05
SCAPERQ9BY12 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC8.48□□□□□ -1.05
SCAPERQ9BY12 AC090424.1-201ENST00000535243 736 ntBASIC8.48□□□□□ -1.05
SCAPERQ9BY12 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC8.48□□□□□ -1.05
SCAPERQ9BY12 MIR4311-201ENST00000580794 100 ntBASIC8.48□□□□□ -1.05
SCAPERQ9BY12 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC8.48□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 209.5 ms