Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 VDAC1P10-201ENST00000416715 891 ntBASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 AL593851.1-201ENST00000426171 157 ntBASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 AP000936.3-201ENST00000438127 255 ntBASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 AC093155.1-201ENST00000440164 826 ntBASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 AC114928.1-201ENST00000446516 415 ntBASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 FAR2P1-206ENST00000449736 709 ntBASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 SEPT7P3-201ENST00000455017 621 ntBASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 OSTCP1-201ENST00000455507 450 ntBASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 RPL37P3-201ENST00000456825 293 ntBASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 RPL31P3-201ENST00000458430 332 ntBASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 AC092754.2-201ENST00000463506 460 ntBASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 SYPL1P1-201ENST00000473622 768 ntBASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 RPL7P6-201ENST00000480903 738 ntBASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 RN7SL267P-201ENST00000485107 261 ntBASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 RN7SL849P-201ENST00000485236 295 ntBASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 CARSP2-201ENST00000520688 277 ntBASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 ARGFXP2-201ENST00000579304 949 ntBASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 TEX41-218ENST00000596540 882 ntTSL 5 BASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 AC096553.1-201ENST00000605169 829 ntBASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
TRAIPQ9BWF2 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
TRAIPQ9BWF2 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
TRAIPQ9BWF2 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC7.84□□□□□ -1.16
TRAIPQ9BWF2 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 SLC10A5P1-201ENST00000379063 1306 ntBASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 DCAF13P3-201ENST00000561147 1334 ntBASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 SNORD116-9-201ENST00000384000 95 ntBASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 SNORD116-3-201ENST00000384287 95 ntBASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 SNORD116-7-201ENST00000384404 95 ntBASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 SNORD116-5-201ENST00000384462 95 ntBASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 PUDPP2-201ENST00000431423 643 ntBASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 AL354710.1-201ENST00000453641 246 ntBASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 RFC5P1-201ENST00000454419 874 ntBASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 PGBD4P1-201ENST00000473644 407 ntBASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 MTCYBP16-201ENST00000509187 1129 ntBASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 AC079395.1-201ENST00000510981 262 ntBASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 SCARNA11.1-201ENST00000516918 132 ntBASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 IGLVIV-64-201ENST00000518581 301 ntBASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 AC105185.1-201ENST00000518705 535 ntBASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 LDHC-203ENST00000535809 757 ntTSL 5 BASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 LDHC-205ENST00000537486 583 ntTSL 5 BASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 UBE2NP1-201ENST00000545592 458 ntBASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 AC013283.1-201ENST00000557282 492 ntBASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 GTF2IP8-201ENST00000560687 584 ntBASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 AL390816.3-201ENST00000604527 1066 ntBASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 AC244100.4-201ENST00000617747 388 ntBASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 AC005753.1-201ENST00000623837 618 ntBASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 OR8D2-201ENST00000624618 1051 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 CASC19-212ENST00000641153 1287 ntBASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC7.83□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms