Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.78□□□□□ -1.48
SNX18Q96RF0 AC092651.1-201ENST00000426110 312 ntBASIC5.78□□□□□ -1.48
SNX18Q96RF0 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.78□□□□□ -1.48
SNX18Q96RF0 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.78□□□□□ -1.48
SNX18Q96RF0 AC092634.2-201ENST00000428146 1010 ntBASIC5.78□□□□□ -1.48
SNX18Q96RF0 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.78□□□□□ -1.48
SNX18Q96RF0 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.78□□□□□ -1.48
SNX18Q96RF0 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.78□□□□□ -1.48
SNX18Q96RF0 NPM1P23-201ENST00000440193 849 ntBASIC5.78□□□□□ -1.48
SNX18Q96RF0 MTND1P33-201ENST00000446251 917 ntBASIC5.78□□□□□ -1.48
SNX18Q96RF0 AL121578.2-201ENST00000448797 447 ntBASIC5.78□□□□□ -1.48
SNX18Q96RF0 AL009048.1-201ENST00000450437 298 ntBASIC5.78□□□□□ -1.48
SNX18Q96RF0 AC099670.1-201ENST00000455141 783 ntBASIC5.78□□□□□ -1.48
SNX18Q96RF0 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC5.78□□□□□ -1.48
SNX18Q96RF0 RN7SL393P-201ENST00000463588 296 ntBASIC5.78□□□□□ -1.48
SNX18Q96RF0 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SNX18Q96RF0 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.78□□□□□ -1.48
SNX18Q96RF0 RPL5P14-201ENST00000494197 878 ntBASIC5.78□□□□□ -1.48
SNX18Q96RF0 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.78□□□□□ -1.48
SNX18Q96RF0 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.78□□□□□ -1.48
SNX18Q96RF0 HMGN1P17-201ENST00000513734 295 ntBASIC5.78□□□□□ -1.48
SNX18Q96RF0 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.78□□□□□ -1.48
SNX18Q96RF0 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SNX18Q96RF0 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC5.78□□□□□ -1.48
SNX18Q96RF0 AC136777.2-201ENST00000522979 358 ntBASIC5.78□□□□□ -1.48
SNX18Q96RF0 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.78□□□□□ -1.48
SNX18Q96RF0 AC084851.2-201ENST00000530377 364 ntBASIC5.78□□□□□ -1.48
SNX18Q96RF0 NPM1P35-201ENST00000533043 868 ntBASIC5.78□□□□□ -1.48
SNX18Q96RF0 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC5.78□□□□□ -1.48
SNX18Q96RF0 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SNX18Q96RF0 AL121579.2-201ENST00000555466 590 ntBASIC5.78□□□□□ -1.48
SNX18Q96RF0 DPPA3P2-202ENST00000557188 1219 ntBASIC5.78□□□□□ -1.48
SNX18Q96RF0 AC090888.2-201ENST00000559765 1144 ntBASIC5.78□□□□□ -1.48
SNX18Q96RF0 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.78□□□□□ -1.48
SNX18Q96RF0 MIR4509-3-201ENST00000578671 94 ntBASIC5.78□□□□□ -1.48
SNX18Q96RF0 MIR4509-2-201ENST00000583920 94 ntBASIC5.78□□□□□ -1.48
SNX18Q96RF0 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.78□□□□□ -1.48
SNX18Q96RF0 AF230666.2-201ENST00000602328 725 ntBASIC5.78□□□□□ -1.48
SNX18Q96RF0 AC009779.8-202ENST00000607990 932 ntBASIC5.78□□□□□ -1.48
SNX18Q96RF0 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.78□□□□□ -1.48
SNX18Q96RF0 MIR4509-1-201ENST00000618224 94 ntBASIC5.78□□□□□ -1.48
SNX18Q96RF0 MRPL57P1-201ENST00000621486 265 ntBASIC5.78□□□□□ -1.48
SNX18Q96RF0 AC138907.10-201ENST00000623708 983 ntBASIC5.78□□□□□ -1.48
SNX18Q96RF0 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.78□□□□□ -1.48
SNX18Q96RF0 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.78□□□□□ -1.48
SNX18Q96RF0 AC073488.9-201ENST00000631601 754 ntBASIC5.78□□□□□ -1.48
SNX18Q96RF0 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SNX18Q96RF0 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.78□□□□□ -1.48
SNX18Q96RF0 AC004158.1-201ENST00000564508 4319 ntBASIC5.78□□□□□ -1.48
SNX18Q96RF0 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SNX18Q96RF0 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SNX18Q96RF0 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
SNX18Q96RF0 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SNX18Q96RF0 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.78□□□□□ -1.48
SNX18Q96RF0 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SNX18Q96RF0 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.78□□□□□ -1.48
SNX18Q96RF0 AC109446.4-201ENST00000623235 2755 ntBASIC5.78□□□□□ -1.48
SNX18Q96RF0 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.78□□□□□ -1.48
SNX18Q96RF0 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
SNX18Q96RF0 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.48
SNX18Q96RF0 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SNX18Q96RF0 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
SNX18Q96RF0 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SNX18Q96RF0 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SNX18Q96RF0 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.77□□□□□ -1.49
SNX18Q96RF0 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SNX18Q96RF0 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SNX18Q96RF0 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SNX18Q96RF0 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.77□□□□□ -1.49
SNX18Q96RF0 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SNX18Q96RF0 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
SNX18Q96RF0 AL442128.2-201ENST00000620246 1824 ntBASIC5.77□□□□□ -1.49
SNX18Q96RF0 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
SNX18Q96RF0 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
SNX18Q96RF0 OR7A2P-201ENST00000304105 930 ntBASIC5.77□□□□□ -1.49
SNX18Q96RF0 PPIAP24-201ENST00000328558 471 ntBASIC5.77□□□□□ -1.49
SNX18Q96RF0 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SNX18Q96RF0 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
SNX18Q96RF0 AC245036.1-201ENST00000391727 309 ntBASIC5.77□□□□□ -1.49
SNX18Q96RF0 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.77□□□□□ -1.49
SNX18Q96RF0 FDPSP5-201ENST00000399474 1057 ntBASIC5.77□□□□□ -1.49
SNX18Q96RF0 U3.43-201ENST00000410734 213 ntBASIC5.77□□□□□ -1.49
SNX18Q96RF0 RNU4-27P-201ENST00000410889 139 ntBASIC5.77□□□□□ -1.49
SNX18Q96RF0 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.77□□□□□ -1.49
SNX18Q96RF0 HYALP1-201ENST00000417674 1279 ntBASIC5.77□□□□□ -1.49
SNX18Q96RF0 NIFKP3-201ENST00000417799 865 ntBASIC5.77□□□□□ -1.49
SNX18Q96RF0 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.77□□□□□ -1.49
SNX18Q96RF0 CYP4F30P-202ENST00000420048 405 ntBASIC5.77□□□□□ -1.49
SNX18Q96RF0 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC5.77□□□□□ -1.49
SNX18Q96RF0 CDC42P6-201ENST00000421246 576 ntBASIC5.77□□□□□ -1.49
SNX18Q96RF0 AL590399.2-201ENST00000427536 309 ntBASIC5.77□□□□□ -1.49
SNX18Q96RF0 AC007563.3-201ENST00000433233 371 ntBASIC5.77□□□□□ -1.49
SNX18Q96RF0 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.77□□□□□ -1.49
SNX18Q96RF0 RNFT1P2-201ENST00000443064 757 ntBASIC5.77□□□□□ -1.49
SNX18Q96RF0 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.77□□□□□ -1.49
SNX18Q96RF0 AL096829.2-201ENST00000446582 742 ntBASIC5.77□□□□□ -1.49
SNX18Q96RF0 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SNX18Q96RF0 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.77□□□□□ -1.49
SNX18Q96RF0 AL445991.1-201ENST00000450381 475 ntBASIC5.77□□□□□ -1.49
SNX18Q96RF0 OR52E7P-201ENST00000452394 933 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 176.6 ms