Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 PTPN3-201ENST00000262539 6832 ntTSL 5 BASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CSMD1Q96PZ7 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 DNAJC19P7-201ENST00000428811 344 ntBASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 AC105399.1-202ENST00000447303 205 ntBASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 AC112187.1-201ENST00000455837 479 ntBASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 AL603882.1-201ENST00000463059 681 ntBASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 DUTP1-201ENST00000493631 470 ntBASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 AC093227.2-201ENST00000589357 285 ntBASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 AC027279.1-201ENST00000568885 4284 ntBASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 DIP2C-202ENST00000381496 7749 ntTSL 5 BASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 MAPK10-270ENST00000641102 3538 ntBASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 RNA5SP387-201ENST00000364226 106 ntBASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 AP003170.5-201ENST00000397185 335 ntBASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 AC119751.6-201ENST00000416712 186 ntBASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 RN7SKP288-201ENST00000516227 268 ntBASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 AP000889.1-201ENST00000530968 660 ntBASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 AC084824.1-201ENST00000550917 1005 ntBASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 EDDM3DP-201ENST00000554692 434 ntBASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 OR4H6P-201ENST00000563771 921 ntBASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 ZNF252P-201ENST00000426361 5210 ntTSL 4 BASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 NLRP3P1-201ENST00000622303 1785 ntBASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 RUNX1T1-250ENST00000614812 7483 ntAPPRIS P3 TSL 5 BASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 AC091167.1-201ENST00000492017 396 ntBASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 AC067959.1-201ENST00000604334 379 ntBASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CSMD1Q96PZ7 TMEM236-201ENST00000377495 5464 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 GPS2P1-201ENST00000411761 986 ntBASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 CCDC11P1-201ENST00000503137 1162 ntBASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 IGLV3-24-201ENST00000517477 197 ntBASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 MIR4284-201ENST00000578924 81 ntBASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 AC091932.2-201ENST00000623014 291 ntBASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 DIO2-202ENST00000438257 6136 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 AL022323.3-201ENST00000623888 5388 ntBASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 NEK1-207ENST00000511633 5536 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 SPTBN1-207ENST00000615901 10226 ntTSL 5 BASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 LINC01963-201ENST00000562038 3148 ntBASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 OR13K1P-201ENST00000444577 975 ntBASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 HMGB1P44-201ENST00000508597 572 ntBASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 DPPA3P2-202ENST00000557188 1219 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms