Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 ALB-220ENST00000621628 1606 ntTSL 5 BASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 TMSB4XP2-201ENST00000335179 210 ntBASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 SNORA51.9-201ENST00000384295 124 ntBASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 AL132875.1-201ENST00000403623 949 ntBASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 AL139805.1-201ENST00000407837 289 ntBASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 RN7SKP144-201ENST00000411108 279 ntBASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 IPPKP1-201ENST00000422501 768 ntBASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 OR5W1P-201ENST00000423705 938 ntBASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 AL445687.2-201ENST00000458156 728 ntBASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 AC105918.1-201ENST00000474399 838 ntBASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 STRADBP1-201ENST00000478954 1281 ntBASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 RBBP4P1-201ENST00000502424 1276 ntBASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 CKS1BP1-201ENST00000555221 240 ntBASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 CYCSP38-201ENST00000559840 322 ntBASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 AC027229.1-201ENST00000583887 253 ntBASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 AL138895.2-201ENST00000603019 178 ntBASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 AC097372.4-201ENST00000625025 466 ntBASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 OR7A1P-202ENST00000641542 1158 ntBASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 AL161912.4-201ENST00000623889 2468 ntBASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC7.28□□□□□ -1.24
CHMP4CQ96CF2 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
CHMP4CQ96CF2 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC7.27□□□□□ -1.25
CHMP4CQ96CF2 AC087516.1-201ENST00000561236 2428 ntBASIC7.27□□□□□ -1.25
CHMP4CQ96CF2 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
CHMP4CQ96CF2 RNU1-49P-201ENST00000363468 159 ntBASIC7.27□□□□□ -1.25
CHMP4CQ96CF2 SNORA43.1-201ENST00000364863 140 ntBASIC7.27□□□□□ -1.25
CHMP4CQ96CF2 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
CHMP4CQ96CF2 AL356968.2-201ENST00000412769 1257 ntBASIC7.27□□□□□ -1.25
CHMP4CQ96CF2 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC7.27□□□□□ -1.25
CHMP4CQ96CF2 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
CHMP4CQ96CF2 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC7.27□□□□□ -1.25
CHMP4CQ96CF2 RPS10P18-201ENST00000442662 495 ntBASIC7.27□□□□□ -1.25
CHMP4CQ96CF2 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC7.27□□□□□ -1.25
CHMP4CQ96CF2 SEPHS1P4-201ENST00000446112 1176 ntBASIC7.27□□□□□ -1.25
CHMP4CQ96CF2 BUD31P2-201ENST00000449374 300 ntBASIC7.27□□□□□ -1.25
CHMP4CQ96CF2 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC7.27□□□□□ -1.25
CHMP4CQ96CF2 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC7.27□□□□□ -1.25
CHMP4CQ96CF2 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC7.27□□□□□ -1.25
CHMP4CQ96CF2 FABP5P6-201ENST00000510588 409 ntBASIC7.27□□□□□ -1.25
CHMP4CQ96CF2 AC090958.1-201ENST00000511122 351 ntBASIC7.27□□□□□ -1.25
CHMP4CQ96CF2 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC7.27□□□□□ -1.25
CHMP4CQ96CF2 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CHMP4CQ96CF2 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC7.27□□□□□ -1.25
CHMP4CQ96CF2 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC7.27□□□□□ -1.25
CHMP4CQ96CF2 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC7.27□□□□□ -1.25
CHMP4CQ96CF2 AC092868.3-201ENST00000560515 784 ntBASIC7.27□□□□□ -1.25
CHMP4CQ96CF2 NDUFA5P11-201ENST00000567995 343 ntBASIC7.27□□□□□ -1.25
CHMP4CQ96CF2 RNU4ATAC-201ENST00000580972 127 ntBASIC7.27□□□□□ -1.25
CHMP4CQ96CF2 QTRT1P1-201ENST00000604344 1078 ntBASIC7.27□□□□□ -1.25
CHMP4CQ96CF2 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC7.27□□□□□ -1.25
CHMP4CQ96CF2 AL138960.1-201ENST00000613838 513 ntBASIC7.27□□□□□ -1.25
CHMP4CQ96CF2 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
CHMP4CQ96CF2 OXSM-209ENST00000626005 309 ntTSL 3 BASIC7.27□□□□□ -1.25
CHMP4CQ96CF2 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC7.27□□□□□ -1.25
CHMP4CQ96CF2 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CHMP4CQ96CF2 AC091305.2-201ENST00000624049 1576 ntBASIC7.27□□□□□ -1.25
CHMP4CQ96CF2 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CHMP4CQ96CF2 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
CHMP4CQ96CF2 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CHMP4CQ96CF2 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CHMP4CQ96CF2 SLC9B1P1-201ENST00000331172 1337 ntBASIC7.27□□□□□ -1.25
CHMP4CQ96CF2 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CHMP4CQ96CF2 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC7.27□□□□□ -1.25
CHMP4CQ96CF2 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 GTF2IP4-201ENST00000453092 2054 ntBASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 AC090220.1-201ENST00000593078 1699 ntBASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 142.6 ms