Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 Z92846.1-201ENST00000456203 268 ntBASIC9.21□□□□□ -0.93
TOPBP1Q92547 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC9.21□□□□□ -0.93
TOPBP1Q92547 AC005000.1-201ENST00000536192 288 ntBASIC9.21□□□□□ -0.93
TOPBP1Q92547 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC9.21□□□□□ -0.93
TOPBP1Q92547 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC9.21□□□□□ -0.93
TOPBP1Q92547 MIR4691-201ENST00000583764 85 ntBASIC9.21□□□□□ -0.93
TOPBP1Q92547 AL023583.1-201ENST00000607518 1143 ntBASIC9.21□□□□□ -0.93
TOPBP1Q92547 MAPK10-365ENST00000641902 3825 ntBASIC9.21□□□□□ -0.93
TOPBP1Q92547 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
TOPBP1Q92547 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC9.21□□□□□ -0.93
TOPBP1Q92547 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
TOPBP1Q92547 ENAH-204ENST00000366844 13168 ntAPPRIS P4 TSL 1 (best) BASIC9.21□□□□□ -0.94
TOPBP1Q92547 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
TOPBP1Q92547 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
TOPBP1Q92547 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
TOPBP1Q92547 MIPEPP2-201ENST00000422560 1819 ntBASIC9.21□□□□□ -0.94
TOPBP1Q92547 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
TOPBP1Q92547 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
TOPBP1Q92547 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
TOPBP1Q92547 SNORD8-201ENST00000363915 110 ntBASIC9.21□□□□□ -0.94
TOPBP1Q92547 RNU6-398P-201ENST00000384143 109 ntBASIC9.21□□□□□ -0.94
TOPBP1Q92547 ATP6V1G1P7-201ENST00000415853 349 ntBASIC9.21□□□□□ -0.94
TOPBP1Q92547 C4BPAP2-201ENST00000428434 478 ntBASIC9.21□□□□□ -0.94
TOPBP1Q92547 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC9.21□□□□□ -0.94
TOPBP1Q92547 AC008072.1-201ENST00000434254 824 ntBASIC9.21□□□□□ -0.94
TOPBP1Q92547 AL596266.1-201ENST00000448132 400 ntBASIC9.21□□□□□ -0.94
TOPBP1Q92547 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC9.21□□□□□ -0.94
TOPBP1Q92547 AC134349.2-201ENST00000535136 910 ntBASIC9.21□□□□□ -0.94
TOPBP1Q92547 DHFRP1-201ENST00000579682 559 ntBASIC9.21□□□□□ -0.94
TOPBP1Q92547 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
TOPBP1Q92547 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC9.2□□□□□ -0.94
TOPBP1Q92547 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC9.2□□□□□ -0.94
TOPBP1Q92547 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
TOPBP1Q92547 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
TOPBP1Q92547 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
TOPBP1Q92547 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
TOPBP1Q92547 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC9.2□□□□□ -0.94
TOPBP1Q92547 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
TOPBP1Q92547 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
TOPBP1Q92547 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
TOPBP1Q92547 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC9.2□□□□□ -0.94
TOPBP1Q92547 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
TOPBP1Q92547 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC9.2□□□□□ -0.94
TOPBP1Q92547 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
TOPBP1Q92547 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
TOPBP1Q92547 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
TOPBP1Q92547 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
TOPBP1Q92547 AC232271.1-201ENST00000602455 2715 ntBASIC9.2□□□□□ -0.94
TOPBP1Q92547 RPS4XP9-201ENST00000405151 780 ntBASIC9.2□□□□□ -0.94
TOPBP1Q92547 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
TOPBP1Q92547 EI24P4-201ENST00000423683 1078 ntBASIC9.2□□□□□ -0.94
TOPBP1Q92547 MGAT2P2-201ENST00000427194 797 ntBASIC9.2□□□□□ -0.94
TOPBP1Q92547 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC9.2□□□□□ -0.94
TOPBP1Q92547 NDUFAF4P3-201ENST00000456468 525 ntBASIC9.2□□□□□ -0.94
TOPBP1Q92547 AC009127.1-201ENST00000467090 155 ntBASIC9.2□□□□□ -0.94
TOPBP1Q92547 STRADBP1-201ENST00000478954 1281 ntBASIC9.2□□□□□ -0.94
TOPBP1Q92547 RPS7P6-201ENST00000485777 579 ntBASIC9.2□□□□□ -0.94
TOPBP1Q92547 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC9.2□□□□□ -0.94
TOPBP1Q92547 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC9.2□□□□□ -0.94
TOPBP1Q92547 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC9.2□□□□□ -0.94
TOPBP1Q92547 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC9.2□□□□□ -0.94
TOPBP1Q92547 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC9.2□□□□□ -0.94
TOPBP1Q92547 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC9.2□□□□□ -0.94
TOPBP1Q92547 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
TOPBP1Q92547 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC9.2□□□□□ -0.94
TOPBP1Q92547 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
TOPBP1Q92547 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
TOPBP1Q92547 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
TOPBP1Q92547 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
TOPBP1Q92547 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC9.19□□□□□ -0.94
TOPBP1Q92547 NLRP3P1-201ENST00000622303 1785 ntBASIC9.19□□□□□ -0.94
TOPBP1Q92547 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
TOPBP1Q92547 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
TOPBP1Q92547 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC9.19□□□□□ -0.94
TOPBP1Q92547 RNA5SP326-201ENST00000363209 110 ntBASIC9.19□□□□□ -0.94
TOPBP1Q92547 RPSAP35-201ENST00000413753 818 ntBASIC9.19□□□□□ -0.94
TOPBP1Q92547 AL133482.1-201ENST00000415988 498 ntBASIC9.19□□□□□ -0.94
TOPBP1Q92547 AL451063.1-201ENST00000450164 1133 ntBASIC9.19□□□□□ -0.94
TOPBP1Q92547 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC9.19□□□□□ -0.94
TOPBP1Q92547 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
TOPBP1Q92547 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
TOPBP1Q92547 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC9.19□□□□□ -0.94
TOPBP1Q92547 OR7H2P-201ENST00000513483 306 ntBASIC9.19□□□□□ -0.94
TOPBP1Q92547 IGHVII-44-2-201ENST00000517728 250 ntBASIC9.19□□□□□ -0.94
TOPBP1Q92547 AC087360.1-201ENST00000518788 616 ntBASIC9.19□□□□□ -0.94
TOPBP1Q92547 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC9.19□□□□□ -0.94
TOPBP1Q92547 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC9.19□□□□□ -0.94
TOPBP1Q92547 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC9.19□□□□□ -0.94
TOPBP1Q92547 AC060766.1-201ENST00000590824 627 ntBASIC9.19□□□□□ -0.94
TOPBP1Q92547 RPL27-207ENST00000590864 569 ntTSL 2 BASIC9.19□□□□□ -0.94
TOPBP1Q92547 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC9.19□□□□□ -0.94
TOPBP1Q92547 AC068790.7-201ENST00000602347 528 ntBASIC9.19□□□□□ -0.94
TOPBP1Q92547 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC9.19□□□□□ -0.94
TOPBP1Q92547 AC074101.1-201ENST00000637861 241 ntBASIC9.19□□□□□ -0.94
TOPBP1Q92547 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
TOPBP1Q92547 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC9.19□□□□□ -0.94
TOPBP1Q92547 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
TOPBP1Q92547 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
TOPBP1Q92547 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
TOPBP1Q92547 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC9.18□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms