Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SHROOM3Q8TF72 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.87□□□□□ -1.47
SHROOM3Q8TF72 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.87□□□□□ -1.47
SHROOM3Q8TF72 RBMY2KP-201ENST00000418221 992 ntBASIC5.87□□□□□ -1.47
SHROOM3Q8TF72 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.87□□□□□ -1.47
SHROOM3Q8TF72 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.87□□□□□ -1.47
SHROOM3Q8TF72 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.87□□□□□ -1.47
SHROOM3Q8TF72 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SHROOM3Q8TF72 ZNF322P1-201ENST00000568013 1209 ntBASIC5.87□□□□□ -1.47
SHROOM3Q8TF72 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.87□□□□□ -1.47
SHROOM3Q8TF72 AC006115.2-201ENST00000596823 202 ntBASIC5.87□□□□□ -1.47
SHROOM3Q8TF72 COX6CP7-201ENST00000597056 208 ntBASIC5.87□□□□□ -1.47
SHROOM3Q8TF72 AL139099.4-201ENST00000614802 114 ntBASIC5.87□□□□□ -1.47
SHROOM3Q8TF72 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.87□□□□□ -1.47
SHROOM3Q8TF72 AP000550.3-201ENST00000637734 379 ntBASIC5.87□□□□□ -1.47
SHROOM3Q8TF72 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SHROOM3Q8TF72 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.87□□□□□ -1.47
SHROOM3Q8TF72 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SHROOM3Q8TF72 AC232271.1-201ENST00000602455 2715 ntBASIC5.87□□□□□ -1.47
SHROOM3Q8TF72 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.87□□□□□ -1.47
SHROOM3Q8TF72 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.87□□□□□ -1.47
SHROOM3Q8TF72 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
SHROOM3Q8TF72 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 HSPD1P7-201ENST00000447985 1686 ntBASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 RNA5SP46-201ENST00000362370 120 ntBASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 AC113412.1-201ENST00000425840 504 ntBASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 AC127526.2-201ENST00000426436 775 ntBASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 RPL34P27-201ENST00000428810 349 ntBASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 RPL21P133-201ENST00000443666 476 ntBASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 YWHAEP1-201ENST00000453697 763 ntBASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 OR7E157P-201ENST00000494376 911 ntBASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 AC093890.1-201ENST00000502554 540 ntBASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 RNU6-615P-201ENST00000516065 106 ntBASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 MIR7155-201ENST00000615925 56 ntBASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 AC104964.3-201ENST00000606115 2860 ntBASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 AC004014.2-201ENST00000623718 5122 ntBASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 AC103591.2-201ENST00000265259 766 ntBASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 RPSAP35-201ENST00000413753 818 ntBASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 AL022331.1-201ENST00000429025 477 ntBASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 FRG2FP-204ENST00000453982 852 ntBASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 AC087360.1-201ENST00000518788 616 ntBASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 AC137627.1-201ENST00000545761 289 ntBASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.86□□□□□ -1.47
SHROOM3Q8TF72 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SHROOM3Q8TF72 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.85□□□□□ -1.47
SHROOM3Q8TF72 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
SHROOM3Q8TF72 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.85□□□□□ -1.47
SHROOM3Q8TF72 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC5.85□□□□□ -1.47
SHROOM3Q8TF72 MRE11P1-201ENST00000464884 2127 ntBASIC5.85□□□□□ -1.47
SHROOM3Q8TF72 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SHROOM3Q8TF72 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SHROOM3Q8TF72 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SHROOM3Q8TF72 KYNUP3-201ENST00000574386 1341 ntBASIC5.85□□□□□ -1.47
SHROOM3Q8TF72 AC138907.8-201ENST00000623981 2256 ntBASIC5.85□□□□□ -1.47
SHROOM3Q8TF72 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
SHROOM3Q8TF72 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SHROOM3Q8TF72 AC007114.2-201ENST00000576014 4281 ntBASIC5.85□□□□□ -1.47
SHROOM3Q8TF72 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.85□□□□□ -1.47
SHROOM3Q8TF72 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.85□□□□□ -1.47
SHROOM3Q8TF72 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
SHROOM3Q8TF72 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.85□□□□□ -1.47
SHROOM3Q8TF72 BMS1P17-202ENST00000416720 316 ntBASIC5.85□□□□□ -1.47
SHROOM3Q8TF72 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.85□□□□□ -1.47
SHROOM3Q8TF72 Z80107.2-201ENST00000445127 392 ntBASIC5.85□□□□□ -1.47
SHROOM3Q8TF72 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.85□□□□□ -1.47
SHROOM3Q8TF72 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.85□□□□□ -1.47
SHROOM3Q8TF72 RN7SL329P-201ENST00000467740 299 ntBASIC5.85□□□□□ -1.47
SHROOM3Q8TF72 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.85□□□□□ -1.47
SHROOM3Q8TF72 OR4A46P-201ENST00000527255 933 ntBASIC5.85□□□□□ -1.47
SHROOM3Q8TF72 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms