Protein–RNA interactions for Protein: Q8N4P3

HDDC3, Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3Q8N4P3 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.99□□□□□ -1.45
HDDC3Q8N4P3 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
HDDC3Q8N4P3 PDZK1P1-202ENST00000425209 1350 ntBASIC5.99□□□□□ -1.45
HDDC3Q8N4P3 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
HDDC3Q8N4P3 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
HDDC3Q8N4P3 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
HDDC3Q8N4P3 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
HDDC3Q8N4P3 SNORD8-201ENST00000363915 110 ntBASIC5.99□□□□□ -1.45
HDDC3Q8N4P3 RNA5SP132-201ENST00000364725 118 ntBASIC5.99□□□□□ -1.45
HDDC3Q8N4P3 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.99□□□□□ -1.45
HDDC3Q8N4P3 SNORA70H-201ENST00000383910 135 ntBASIC5.99□□□□□ -1.45
HDDC3Q8N4P3 SNORA70J-201ENST00000384182 135 ntBASIC5.99□□□□□ -1.45
HDDC3Q8N4P3 OR7E101P-201ENST00000400428 513 ntBASIC5.99□□□□□ -1.45
HDDC3Q8N4P3 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.99□□□□□ -1.45
HDDC3Q8N4P3 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.99□□□□□ -1.45
HDDC3Q8N4P3 AC104164.1-201ENST00000460282 590 ntBASIC5.99□□□□□ -1.45
HDDC3Q8N4P3 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.99□□□□□ -1.45
HDDC3Q8N4P3 RN7SL165P-201ENST00000477476 291 ntBASIC5.99□□□□□ -1.45
HDDC3Q8N4P3 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.99□□□□□ -1.45
HDDC3Q8N4P3 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.99□□□□□ -1.45
HDDC3Q8N4P3 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.99□□□□□ -1.45
HDDC3Q8N4P3 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.99□□□□□ -1.45
HDDC3Q8N4P3 RNA5SP34-201ENST00000516887 130 ntBASIC5.99□□□□□ -1.45
HDDC3Q8N4P3 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.99□□□□□ -1.45
HDDC3Q8N4P3 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HDDC3Q8N4P3 AC119403.2-201ENST00000590960 598 ntBASIC5.99□□□□□ -1.45
HDDC3Q8N4P3 FO393422.1-201ENST00000603908 708 ntBASIC5.99□□□□□ -1.45
HDDC3Q8N4P3 AC104695.2-201ENST00000605056 775 ntBASIC5.99□□□□□ -1.45
HDDC3Q8N4P3 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.99□□□□□ -1.45
HDDC3Q8N4P3 uc_338.26-201ENST00000612659 160 ntBASIC5.99□□□□□ -1.45
HDDC3Q8N4P3 AC004836.1-201ENST00000623032 634 ntBASIC5.99□□□□□ -1.45
HDDC3Q8N4P3 AC021766.1-201ENST00000624404 741 ntBASIC5.99□□□□□ -1.45
HDDC3Q8N4P3 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HDDC3Q8N4P3 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.99□□□□□ -1.45
HDDC3Q8N4P3 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
HDDC3Q8N4P3 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.99□□□□□ -1.45
HDDC3Q8N4P3 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
HDDC3Q8N4P3 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.99□□□□□ -1.45
HDDC3Q8N4P3 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HDDC3Q8N4P3 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HDDC3Q8N4P3 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.98□□□□□ -1.45
HDDC3Q8N4P3 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HDDC3Q8N4P3 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HDDC3Q8N4P3 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.98□□□□□ -1.45
HDDC3Q8N4P3 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
HDDC3Q8N4P3 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.98□□□□□ -1.45
HDDC3Q8N4P3 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.98□□□□□ -1.45
HDDC3Q8N4P3 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HDDC3Q8N4P3 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HDDC3Q8N4P3 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
HDDC3Q8N4P3 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
HDDC3Q8N4P3 AL445213.1-201ENST00000412589 747 ntBASIC5.98□□□□□ -1.45
HDDC3Q8N4P3 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.98□□□□□ -1.45
HDDC3Q8N4P3 AC234781.4-201ENST00000419384 244 ntBASIC5.98□□□□□ -1.45
HDDC3Q8N4P3 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.98□□□□□ -1.45
HDDC3Q8N4P3 RPS27P18-201ENST00000431701 247 ntBASIC5.98□□□□□ -1.45
HDDC3Q8N4P3 AL445928.1-201ENST00000435545 222 ntBASIC5.98□□□□□ -1.45
HDDC3Q8N4P3 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.98□□□□□ -1.45
HDDC3Q8N4P3 RPS7P3-201ENST00000443360 580 ntBASIC5.98□□□□□ -1.45
HDDC3Q8N4P3 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.98□□□□□ -1.45
HDDC3Q8N4P3 OR52Y1P-201ENST00000452418 828 ntBASIC5.98□□□□□ -1.45
HDDC3Q8N4P3 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.98□□□□□ -1.45
HDDC3Q8N4P3 AL022319.1-201ENST00000458183 1167 ntBASIC5.98□□□□□ -1.45
HDDC3Q8N4P3 RN7SL515P-201ENST00000463999 297 ntBASIC5.98□□□□□ -1.45
HDDC3Q8N4P3 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HDDC3Q8N4P3 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HDDC3Q8N4P3 MIR4505-201ENST00000582238 73 ntBASIC5.98□□□□□ -1.45
HDDC3Q8N4P3 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HDDC3Q8N4P3 AC004948.1-201ENST00000609858 672 ntBASIC5.98□□□□□ -1.45
HDDC3Q8N4P3 AC079395.2-201ENST00000610982 737 ntBASIC5.98□□□□□ -1.45
HDDC3Q8N4P3 AL035661.1-201ENST00000620459 1144 ntBASIC5.98□□□□□ -1.45
HDDC3Q8N4P3 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HDDC3Q8N4P3 AL353763.1-201ENST00000624467 1628 ntBASIC5.98□□□□□ -1.45
HDDC3Q8N4P3 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HDDC3Q8N4P3 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HDDC3Q8N4P3 CUL4AP1-201ENST00000514750 1863 ntBASIC5.98□□□□□ -1.45
HDDC3Q8N4P3 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.98□□□□□ -1.45
HDDC3Q8N4P3 AC006511.3-201ENST00000624929 1783 ntBASIC5.98□□□□□ -1.45
HDDC3Q8N4P3 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.98□□□□□ -1.45
HDDC3Q8N4P3 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HDDC3Q8N4P3 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.97□□□□□ -1.45
HDDC3Q8N4P3 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.97□□□□□ -1.45
HDDC3Q8N4P3 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HDDC3Q8N4P3 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
HDDC3Q8N4P3 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
HDDC3Q8N4P3 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
HDDC3Q8N4P3 AC016583.1-201ENST00000624221 2431 ntBASIC5.97□□□□□ -1.45
HDDC3Q8N4P3 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HDDC3Q8N4P3 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HDDC3Q8N4P3 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HDDC3Q8N4P3 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
HDDC3Q8N4P3 U3.7-201ENST00000363668 216 ntBASIC5.97□□□□□ -1.45
HDDC3Q8N4P3 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.97□□□□□ -1.45
HDDC3Q8N4P3 RNU4-34P-201ENST00000410431 124 ntBASIC5.97□□□□□ -1.45
HDDC3Q8N4P3 AP000534.2-201ENST00000412729 568 ntBASIC5.97□□□□□ -1.45
HDDC3Q8N4P3 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.97□□□□□ -1.45
HDDC3Q8N4P3 PTCD2P2-201ENST00000415579 1095 ntBASIC5.97□□□□□ -1.45
HDDC3Q8N4P3 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.97□□□□□ -1.45
HDDC3Q8N4P3 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.97□□□□□ -1.45
HDDC3Q8N4P3 AC007562.1-201ENST00000421819 517 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms