Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 AL512662.1-201ENST00000624850 2251 ntBASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 OR2AH1P-202ENST00000641232 2744 ntBASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 DEFB124-201ENST00000317676 216 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 TRBV6-1-201ENST00000390353 401 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 SNORA57.2-201ENST00000391265 128 ntBASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 FCRL6-204ENST00000392235 947 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 AC234778.1-201ENST00000399253 370 ntBASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 YWHAZP6-201ENST00000399764 738 ntBASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 LSM5-202ENST00000409292 538 ntTSL 2 BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 VN2R10P-201ENST00000411871 853 ntBASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 VDAC1P2-201ENST00000423609 850 ntBASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 ZYG11AP1-201ENST00000430329 837 ntBASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 ANKRD54P1-201ENST00000433115 471 ntBASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 TBL1YP1-201ENST00000440297 1026 ntBASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 TXNP5-201ENST00000441043 315 ntBASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 SFTPA3P-201ENST00000446429 367 ntBASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 VNN3-210ENST00000450865 596 ntTSL 4 BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 CDKN2AIPNLP1-201ENST00000460287 302 ntBASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 AC117394.1-201ENST00000477323 567 ntBASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 RPL15P21-201ENST00000495592 567 ntBASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 AC090638.1-201ENST00000498296 909 ntBASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 AC015909.1-201ENST00000509943 839 ntTSL 3 BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 KCTD9P2-201ENST00000512203 1013 ntBASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 SNORA18.6-201ENST00000516792 115 ntBASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 IGKV2D-14-201ENST00000522473 355 ntBASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 AC018653.2-201ENST00000540190 238 ntBASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 MUCL1-202ENST00000546809 439 ntAPPRIS ALT2 TSL 3 BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 AL109628.2-201ENST00000554037 201 ntBASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 C16orf45-203ENST00000561692 534 ntTSL 3 BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 AC138907.5-201ENST00000561744 273 ntTSL 5 BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 AC093519.1-201ENST00000566109 298 ntBASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 RN7SL619P-201ENST00000581753 258 ntBASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 AC003002.3-201ENST00000597410 521 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 AC064836.2-201ENST00000609491 462 ntBASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 MIR6505-201ENST00000617206 71 ntBASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 AC126177.8-201ENST00000618339 1015 ntBASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 MIR6807-201ENST00000621968 92 ntBASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 AC009033.1-201ENST00000624279 431 ntBASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 PGAM1P5-203ENST00000626376 313 ntTSL 5 BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 AL356599.1-202ENST00000626919 218 ntTSL 5 BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 SMG7-216ENST00000638826 219 ntTSL 2 BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 SHC4-203ENST00000537958 1447 ntTSL 2 BASIC7.4□□□□□ -1.22
DEPDC4Q8N2C3 PLRG1-201ENST00000302078 1673 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
DEPDC4Q8N2C3 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC7.4□□□□□ -1.23
DEPDC4Q8N2C3 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
DEPDC4Q8N2C3 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
DEPDC4Q8N2C3 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
DEPDC4Q8N2C3 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC7.4□□□□□ -1.23
DEPDC4Q8N2C3 CLRN1-AS1-202ENST00000476886 2223 ntTSL 2 BASIC7.4□□□□□ -1.23
DEPDC4Q8N2C3 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
DEPDC4Q8N2C3 PAH-201ENST00000307000 2466 ntTSL 5 BASIC7.4□□□□□ -1.23
DEPDC4Q8N2C3 AL589993.1-201ENST00000407450 2524 ntBASIC7.4□□□□□ -1.23
DEPDC4Q8N2C3 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
DEPDC4Q8N2C3 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
DEPDC4Q8N2C3 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC7.4□□□□□ -1.23
DEPDC4Q8N2C3 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
DEPDC4Q8N2C3 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
DEPDC4Q8N2C3 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 Z99129.4-201ENST00000624649 2435 ntBASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 AC116158.1-201ENST00000560231 2129 ntBASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 AL022578.1-201ENST00000439330 1433 ntBASIC7.39□□□□□ -1.23
DEPDC4Q8N2C3 OFD1P8Y-201ENST00000449148 1433 ntBASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms