Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 SULT1D1P-201ENST00000458020 882 ntBASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 RN7SL149P-201ENST00000465197 281 ntBASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 RN7SL332P-201ENST00000482163 254 ntBASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 AC079594.1-201ENST00000489757 331 ntBASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 AC112225.1-201ENST00000508230 297 ntBASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 AC009646.1-201ENST00000510455 318 ntBASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 LINC01094-206ENST00000514130 594 ntTSL 4 BASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 MRPS5P3-201ENST00000515577 166 ntBASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 HMGB1P41-201ENST00000520234 440 ntBASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 AC107952.1-201ENST00000524200 376 ntBASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 AP001646.2-201ENST00000528645 1156 ntBASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 AC126177.6-201ENST00000550420 1009 ntBASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 GNG2-215ENST00000557376 573 ntTSL 4 BASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 AC091932.1-201ENST00000569381 427 ntBASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 AL451085.1-201ENST00000604546 690 ntBASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 AL603758.1-201ENST00000618654 241 ntBASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 C5orf56-207ENST00000621237 486 ntAPPRIS P5 TSL 2 BASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 ABBA01000935.2-201ENST00000637477 838 ntBASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 AC104964.2-201ENST00000562242 4641 ntBASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 XRCC6P5-201ENST00000435236 1795 ntBASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 MKL2-205ENST00000572567 2185 ntTSL 2 BASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 WBP2NL-201ENST00000328823 2255 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 FLG-AS1-202ENST00000392688 2995 ntTSL 2 BASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 CYFIP2-221ENST00000618329 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 LINC01692-201ENST00000441009 2719 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 DDX10P2-201ENST00000417796 2614 ntBASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 SOSTDC1-202ENST00000396652 2411 ntTSL 2 BASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 NPL-203ENST00000367553 2231 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 AC068733.2-201ENST00000605434 1418 ntBASIC7.78□□□□□ -1.16
NPAS3Q8IXF0 RIPOR2-205ENST00000510784 3381 ntTSL 2 BASIC7.77□□□□□ -1.16
NPAS3Q8IXF0 XIRP2-202ENST00000409043 3292 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.16
NPAS3Q8IXF0 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC7.77□□□□□ -1.16
NPAS3Q8IXF0 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.16
NPAS3Q8IXF0 BTK-210ENST00000621635 2767 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
NPAS3Q8IXF0 AKAP7-202ENST00000342266 2461 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 PTPN14-205ENST00000543945 3842 ntTSL 5 BASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 TDGF1P3-202ENST00000602699 2710 ntBASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 C1D-202ENST00000407324 1379 ntTSL 3 BASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 RNU6-931P-201ENST00000363850 107 ntBASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 RNU6-877P-201ENST00000383868 107 ntBASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 CREM-214ENST00000395887 849 ntTSL 5 BASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 NCSTNP1-201ENST00000406229 144 ntBASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 RPL5P18-201ENST00000406671 891 ntBASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 USP32P1-203ENST00000417524 1014 ntTSL 5 BASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 AL353193.1-201ENST00000421444 268 ntBASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 AC007742.1-201ENST00000425789 329 ntBASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 IGLV3-4-201ENST00000432300 244 ntBASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 ELOCP26-201ENST00000436067 329 ntBASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 AL604028.2-201ENST00000437848 788 ntBASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 ARMC4P1-201ENST00000438905 707 ntBASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 AC009244.1-201ENST00000450566 258 ntBASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 CECR9-201ENST00000453421 199 ntBASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 AC021660.1-201ENST00000465006 554 ntBASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 RPL35AP19-201ENST00000469425 329 ntBASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 AP002884.1-201ENST00000479691 655 ntBASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 AC104971.1-201ENST00000495117 578 ntBASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 RN7SL612P-201ENST00000497704 295 ntBASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 HPRT1P2-201ENST00000505250 544 ntBASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 COX6CP5-201ENST00000527162 228 ntBASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 AP000435.1-201ENST00000528539 496 ntBASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 AC023442.1-201ENST00000531247 422 ntBASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 OR6M3P-201ENST00000531567 700 ntBASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 OR5AN2P-201ENST00000534535 896 ntBASIC7.77□□□□□ -1.17
NPAS3Q8IXF0 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms