Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AL731532.1-201ENST00000623972 4236 ntBASIC6.93□□□□□ -1.3
CTR9Q6PD62 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
CTR9Q6PD62 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
CTR9Q6PD62 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.93□□□□□ -1.3
CTR9Q6PD62 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.92□□□□□ -1.3
CTR9Q6PD62 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CTR9Q6PD62 AL355488.2-201ENST00000609909 2850 ntBASIC6.92□□□□□ -1.3
CTR9Q6PD62 MFSD8-219ENST00000641228 2559 ntBASIC6.92□□□□□ -1.3
CTR9Q6PD62 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
CTR9Q6PD62 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CTR9Q6PD62 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CTR9Q6PD62 AC092642.1-201ENST00000392417 425 ntBASIC6.92□□□□□ -1.3
CTR9Q6PD62 HMGB1P20-201ENST00000402555 677 ntBASIC6.92□□□□□ -1.3
CTR9Q6PD62 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.92□□□□□ -1.3
CTR9Q6PD62 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.92□□□□□ -1.3
CTR9Q6PD62 AL357752.1-201ENST00000412817 349 ntBASIC6.92□□□□□ -1.3
CTR9Q6PD62 AK4P4-201ENST00000419465 646 ntBASIC6.92□□□□□ -1.3
CTR9Q6PD62 HMGB3P24-201ENST00000433260 622 ntBASIC6.92□□□□□ -1.3
CTR9Q6PD62 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.92□□□□□ -1.3
CTR9Q6PD62 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.92□□□□□ -1.3
CTR9Q6PD62 AP000281.1-201ENST00000444036 316 ntBASIC6.92□□□□□ -1.3
CTR9Q6PD62 RPSAP37-201ENST00000470913 821 ntBASIC6.92□□□□□ -1.3
CTR9Q6PD62 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CTR9Q6PD62 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.92□□□□□ -1.3
CTR9Q6PD62 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.92□□□□□ -1.3
CTR9Q6PD62 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.92□□□□□ -1.3
CTR9Q6PD62 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.92□□□□□ -1.3
CTR9Q6PD62 RNA5SP440-201ENST00000612665 119 ntBASIC6.92□□□□□ -1.3
CTR9Q6PD62 RN7SL787P-201ENST00000613000 284 ntBASIC6.92□□□□□ -1.3
CTR9Q6PD62 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.92□□□□□ -1.3
CTR9Q6PD62 AL355480.1-201ENST00000629041 99 ntBASIC6.92□□□□□ -1.3
CTR9Q6PD62 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.92□□□□□ -1.3
CTR9Q6PD62 AC007842.1-201ENST00000597336 2039 ntBASIC6.92□□□□□ -1.3
CTR9Q6PD62 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.92□□□□□ -1.3
CTR9Q6PD62 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
CTR9Q6PD62 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CTR9Q6PD62 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
CTR9Q6PD62 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CTR9Q6PD62 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CTR9Q6PD62 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CTR9Q6PD62 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
CTR9Q6PD62 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.92□□□□□ -1.3
CTR9Q6PD62 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
CTR9Q6PD62 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
CTR9Q6PD62 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
CTR9Q6PD62 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CTR9Q6PD62 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CTR9Q6PD62 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
CTR9Q6PD62 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
CTR9Q6PD62 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.91□□□□□ -1.3
CTR9Q6PD62 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
CTR9Q6PD62 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CTR9Q6PD62 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
CTR9Q6PD62 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CTR9Q6PD62 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CTR9Q6PD62 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CTR9Q6PD62 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
CTR9Q6PD62 AC022164.1-201ENST00000568767 2673 ntBASIC6.91□□□□□ -1.3
CTR9Q6PD62 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CTR9Q6PD62 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
CTR9Q6PD62 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.91□□□□□ -1.3
CTR9Q6PD62 CHEK2P5-201ENST00000423877 246 ntBASIC6.91□□□□□ -1.3
CTR9Q6PD62 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.91□□□□□ -1.3
CTR9Q6PD62 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC6.91□□□□□ -1.3
CTR9Q6PD62 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.91□□□□□ -1.3
CTR9Q6PD62 RPS27AP2-201ENST00000457576 465 ntBASIC6.91□□□□□ -1.3
CTR9Q6PD62 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.91□□□□□ -1.3
CTR9Q6PD62 TOMM22P4-201ENST00000511318 336 ntBASIC6.91□□□□□ -1.3
CTR9Q6PD62 CYCSP22-201ENST00000517555 339 ntBASIC6.91□□□□□ -1.3
CTR9Q6PD62 AC139365.2-201ENST00000517972 253 ntBASIC6.91□□□□□ -1.3
CTR9Q6PD62 AP001496.3-201ENST00000580230 913 ntBASIC6.91□□□□□ -1.3
CTR9Q6PD62 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CTR9Q6PD62 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.91□□□□□ -1.3
CTR9Q6PD62 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.91□□□□□ -1.3
CTR9Q6PD62 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
CTR9Q6PD62 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CTR9Q6PD62 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
CTR9Q6PD62 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
CTR9Q6PD62 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CTR9Q6PD62 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CTR9Q6PD62 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CTR9Q6PD62 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CTR9Q6PD62 AC005224.3-201ENST00000584683 2140 ntBASIC6.91□□□□□ -1.3
CTR9Q6PD62 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CTR9Q6PD62 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CTR9Q6PD62 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CTR9Q6PD62 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CTR9Q6PD62 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
CTR9Q6PD62 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CTR9Q6PD62 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
CTR9Q6PD62 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CTR9Q6PD62 AL161756.3-201ENST00000641216 2071 ntBASIC6.9□□□□□ -1.3
CTR9Q6PD62 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CTR9Q6PD62 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CTR9Q6PD62 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.9□□□□□ -1.3
CTR9Q6PD62 RN7SKP206-201ENST00000410823 293 ntBASIC6.9□□□□□ -1.3
CTR9Q6PD62 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.9□□□□□ -1.3
CTR9Q6PD62 AL354766.1-201ENST00000423396 542 ntBASIC6.9□□□□□ -1.3
CTR9Q6PD62 AL662874.1-201ENST00000426065 230 ntBASIC6.9□□□□□ -1.3
CTR9Q6PD62 AL365220.1-201ENST00000432923 399 ntBASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms