Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 DYNLL1P1-201ENST00000595442 269 ntBASIC6.33□□□□□ -1.4
CCDC38Q502W7 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC38Q502W7 AC098483.2-201ENST00000603158 454 ntBASIC6.33□□□□□ -1.4
CCDC38Q502W7 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.33□□□□□ -1.4
CCDC38Q502W7 AC004890.3-201ENST00000605566 1095 ntBASIC6.33□□□□□ -1.4
CCDC38Q502W7 AL022394.1-201ENST00000606979 292 ntBASIC6.33□□□□□ -1.4
CCDC38Q502W7 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC38Q502W7 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC38Q502W7 BANCR-201ENST00000624238 473 ntTSL 2 BASIC6.33□□□□□ -1.4
CCDC38Q502W7 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
CCDC38Q502W7 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
CCDC38Q502W7 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
CCDC38Q502W7 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.33□□□□□ -1.4
CCDC38Q502W7 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.33□□□□□ -1.4
CCDC38Q502W7 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC38Q502W7 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC38Q502W7 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.33□□□□□ -1.4
CCDC38Q502W7 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC38Q502W7 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
CCDC38Q502W7 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
CCDC38Q502W7 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC38Q502W7 AC004158.1-201ENST00000564508 4319 ntBASIC6.32□□□□□ -1.4
CCDC38Q502W7 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC38Q502W7 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC38Q502W7 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC38Q502W7 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC38Q502W7 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC38Q502W7 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC38Q502W7 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC38Q502W7 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
CCDC38Q502W7 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC38Q502W7 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC38Q502W7 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC38Q502W7 RNA5SP453-201ENST00000362503 119 ntBASIC6.32□□□□□ -1.4
CCDC38Q502W7 RNA5SP485-201ENST00000365053 119 ntBASIC6.32□□□□□ -1.4
CCDC38Q502W7 RNA5SP77-201ENST00000365394 120 ntBASIC6.32□□□□□ -1.4
CCDC38Q502W7 SNORA64.3-201ENST00000365647 134 ntBASIC6.32□□□□□ -1.4
CCDC38Q502W7 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC38Q502W7 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC38Q502W7 RPL21P50-201ENST00000417698 477 ntBASIC6.32□□□□□ -1.4
CCDC38Q502W7 MTND4LP13-201ENST00000425022 298 ntBASIC6.32□□□□□ -1.4
CCDC38Q502W7 RPS7P14-201ENST00000426405 583 ntBASIC6.32□□□□□ -1.4
CCDC38Q502W7 AL513321.1-201ENST00000441175 761 ntBASIC6.32□□□□□ -1.4
CCDC38Q502W7 AC006326.1-201ENST00000445465 787 ntBASIC6.32□□□□□ -1.4
CCDC38Q502W7 AL161722.1-201ENST00000446972 1032 ntBASIC6.32□□□□□ -1.4
CCDC38Q502W7 ZNF736P6Y-201ENST00000447526 1213 ntBASIC6.32□□□□□ -1.4
CCDC38Q502W7 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC38Q502W7 RBMY2HP-201ENST00000457961 720 ntBASIC6.32□□□□□ -1.4
CCDC38Q502W7 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC38Q502W7 RN7SL643P-201ENST00000471845 291 ntBASIC6.32□□□□□ -1.4
CCDC38Q502W7 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC38Q502W7 AC106806.2-201ENST00000509365 500 ntBASIC6.32□□□□□ -1.4
CCDC38Q502W7 AC021146.7-201ENST00000509604 775 ntBASIC6.32□□□□□ -1.4
CCDC38Q502W7 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.32□□□□□ -1.4
CCDC38Q502W7 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC38Q502W7 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC38Q502W7 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC38Q502W7 AC092865.1-201ENST00000544395 1023 ntBASIC6.32□□□□□ -1.4
CCDC38Q502W7 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC38Q502W7 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC38Q502W7 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC38Q502W7 ARGFXP2-201ENST00000579304 949 ntBASIC6.32□□□□□ -1.4
CCDC38Q502W7 AP001357.1-201ENST00000586304 1053 ntBASIC6.32□□□□□ -1.4
CCDC38Q502W7 AC063977.7-201ENST00000594454 337 ntBASIC6.32□□□□□ -1.4
CCDC38Q502W7 AC012368.3-201ENST00000604190 219 ntBASIC6.32□□□□□ -1.4
CCDC38Q502W7 AC015849.2-201ENST00000605738 409 ntBASIC6.32□□□□□ -1.4
CCDC38Q502W7 AL356608.1-201ENST00000610034 820 ntBASIC6.32□□□□□ -1.4
CCDC38Q502W7 AL138960.2-201ENST00000625145 535 ntBASIC6.32□□□□□ -1.4
CCDC38Q502W7 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.32□□□□□ -1.4
CCDC38Q502W7 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC38Q502W7 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC38Q502W7 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC38Q502W7 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC38Q502W7 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC38Q502W7 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC38Q502W7 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC38Q502W7 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC38Q502W7 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC38Q502W7 AC107021.2-201ENST00000567714 2095 ntBASIC6.32□□□□□ -1.4
CCDC38Q502W7 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CCDC38Q502W7 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC38Q502W7 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC38Q502W7 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CCDC38Q502W7 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC38Q502W7 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC38Q502W7 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC38Q502W7 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC38Q502W7 KYNUP3-201ENST00000574386 1341 ntBASIC6.31□□□□□ -1.4
CCDC38Q502W7 AL359091.1-201ENST00000449048 1734 ntBASIC6.31□□□□□ -1.4
CCDC38Q502W7 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC38Q502W7 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC38Q502W7 RPL11P4-201ENST00000332269 436 ntBASIC6.31□□□□□ -1.4
CCDC38Q502W7 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC38Q502W7 RNU6-1263P-201ENST00000384601 106 ntBASIC6.31□□□□□ -1.4
CCDC38Q502W7 MIR551B-201ENST00000384984 96 ntBASIC6.31□□□□□ -1.4
CCDC38Q502W7 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CCDC38Q502W7 YWHAZP4-201ENST00000392459 708 ntBASIC6.31□□□□□ -1.4
CCDC38Q502W7 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.31□□□□□ -1.4
CCDC38Q502W7 OSTCP4-201ENST00000424397 449 ntBASIC6.31□□□□□ -1.4
CCDC38Q502W7 AL365220.1-201ENST00000432923 399 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms