Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 IGBP1P3-201ENST00000447449 1000 ntBASIC6.32□□□□□ -1.4
TPM4P67936 NPM1P19-201ENST00000450070 712 ntBASIC6.32□□□□□ -1.4
TPM4P67936 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TPM4P67936 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC6.32□□□□□ -1.4
TPM4P67936 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.32□□□□□ -1.4
TPM4P67936 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.32□□□□□ -1.4
TPM4P67936 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.32□□□□□ -1.4
TPM4P67936 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TPM4P67936 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.32□□□□□ -1.4
TPM4P67936 AC020937.1-201ENST00000519677 1013 ntBASIC6.32□□□□□ -1.4
TPM4P67936 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TPM4P67936 AC091078.2-201ENST00000557145 559 ntBASIC6.32□□□□□ -1.4
TPM4P67936 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.32□□□□□ -1.4
TPM4P67936 HMGN2P47-201ENST00000559378 272 ntBASIC6.32□□□□□ -1.4
TPM4P67936 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC6.32□□□□□ -1.4
TPM4P67936 MIR3157-201ENST00000578688 85 ntBASIC6.32□□□□□ -1.4
TPM4P67936 RN7SL66P-201ENST00000582099 264 ntBASIC6.32□□□□□ -1.4
TPM4P67936 AL136131.3-201ENST00000607600 188 ntBASIC6.32□□□□□ -1.4
TPM4P67936 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TPM4P67936 AL353684.1-201ENST00000622677 1120 ntBASIC6.32□□□□□ -1.4
TPM4P67936 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TPM4P67936 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TPM4P67936 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC6.32□□□□□ -1.4
TPM4P67936 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TPM4P67936 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
TPM4P67936 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
TPM4P67936 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
TPM4P67936 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TPM4P67936 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
TPM4P67936 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
TPM4P67936 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TPM4P67936 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TPM4P67936 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.32□□□□□ -1.4
TPM4P67936 AL132656.3-201ENST00000606384 1595 ntBASIC6.31□□□□□ -1.4
TPM4P67936 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.31□□□□□ -1.4
TPM4P67936 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TPM4P67936 OR5AQ1P-203ENST00000641818 1529 ntBASIC6.31□□□□□ -1.4
TPM4P67936 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.31□□□□□ -1.4
TPM4P67936 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC6.31□□□□□ -1.4
TPM4P67936 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.31□□□□□ -1.4
TPM4P67936 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.31□□□□□ -1.4
TPM4P67936 RNA5SP326-201ENST00000363209 110 ntBASIC6.31□□□□□ -1.4
TPM4P67936 U3.7-201ENST00000363668 216 ntBASIC6.31□□□□□ -1.4
TPM4P67936 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.31□□□□□ -1.4
TPM4P67936 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.31□□□□□ -1.4
TPM4P67936 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.31□□□□□ -1.4
TPM4P67936 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.31□□□□□ -1.4
TPM4P67936 AC099782.1-201ENST00000425889 474 ntBASIC6.31□□□□□ -1.4
TPM4P67936 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.31□□□□□ -1.4
TPM4P67936 SUMO2P8-201ENST00000434672 286 ntBASIC6.31□□□□□ -1.4
TPM4P67936 NDUFB4P8-201ENST00000435351 367 ntBASIC6.31□□□□□ -1.4
TPM4P67936 AC023141.3-201ENST00000436698 278 ntBASIC6.31□□□□□ -1.4
TPM4P67936 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.31□□□□□ -1.4
TPM4P67936 HMGN1P16-201ENST00000508308 283 ntBASIC6.31□□□□□ -1.4
TPM4P67936 PRMT5P1-201ENST00000514351 598 ntBASIC6.31□□□□□ -1.4
TPM4P67936 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.31□□□□□ -1.4
TPM4P67936 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC6.31□□□□□ -1.4
TPM4P67936 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.31□□□□□ -1.4
TPM4P67936 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.31□□□□□ -1.4
TPM4P67936 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.31□□□□□ -1.4
TPM4P67936 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.31□□□□□ -1.4
TPM4P67936 NMNAT1P5-201ENST00000559657 841 ntBASIC6.31□□□□□ -1.4
TPM4P67936 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.31□□□□□ -1.4
TPM4P67936 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.31□□□□□ -1.4
TPM4P67936 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.31□□□□□ -1.4
TPM4P67936 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
TPM4P67936 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
TPM4P67936 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TPM4P67936 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
TPM4P67936 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TPM4P67936 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.3□□□□□ -1.4
TPM4P67936 AC083899.1-201ENST00000454465 3819 ntBASIC6.3□□□□□ -1.4
TPM4P67936 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC6.3□□□□□ -1.4
TPM4P67936 MRRFP1-201ENST00000435941 1675 ntBASIC6.3□□□□□ -1.4
TPM4P67936 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TPM4P67936 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC6.3□□□□□ -1.4
TPM4P67936 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.3□□□□□ -1.4
TPM4P67936 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
TPM4P67936 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TPM4P67936 MIR431-201ENST00000385266 114 ntBASIC6.3□□□□□ -1.4
TPM4P67936 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
TPM4P67936 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
TPM4P67936 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.3□□□□□ -1.4
TPM4P67936 RIMKLBP2-201ENST00000424737 654 ntBASIC6.3□□□□□ -1.4
TPM4P67936 AL353662.1-201ENST00000439099 327 ntBASIC6.3□□□□□ -1.4
TPM4P67936 NANOGP9-201ENST00000439890 892 ntBASIC6.3□□□□□ -1.4
TPM4P67936 RPS7P10-201ENST00000464254 603 ntBASIC6.3□□□□□ -1.4
TPM4P67936 AC005017.1-201ENST00000482002 490 ntBASIC6.3□□□□□ -1.4
TPM4P67936 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.3□□□□□ -1.4
TPM4P67936 TMEM97P2-201ENST00000517841 403 ntBASIC6.3□□□□□ -1.4
TPM4P67936 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.3□□□□□ -1.4
TPM4P67936 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC6.3□□□□□ -1.4
TPM4P67936 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.3□□□□□ -1.4
TPM4P67936 MIR4701-201ENST00000583094 63 ntBASIC6.3□□□□□ -1.4
TPM4P67936 AC008507.3-201ENST00000585753 472 ntBASIC6.3□□□□□ -1.4
TPM4P67936 WBP1LP11-201ENST00000586141 328 ntBASIC6.3□□□□□ -1.4
TPM4P67936 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.3□□□□□ -1.4
TPM4P67936 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
TPM4P67936 AL135999.3-201ENST00000610501 812 ntBASIC6.3□□□□□ -1.4
TPM4P67936 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms