Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 BTG4P1-201ENST00000510421 183 ntBASIC4.1□□□□□ -1.75
CKS1BP61024 CFI-204ENST00000510800 667 ntTSL 2 BASIC4.1□□□□□ -1.75
CKS1BP61024 AC096661.1-201ENST00000515870 822 ntBASIC4.1□□□□□ -1.75
CKS1BP61024 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC4.1□□□□□ -1.75
CKS1BP61024 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC4.1□□□□□ -1.75
CKS1BP61024 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC4.1□□□□□ -1.75
CKS1BP61024 AC026956.1-201ENST00000558741 396 ntBASIC4.1□□□□□ -1.75
CKS1BP61024 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.1□□□□□ -1.75
CKS1BP61024 AC122134.1-201ENST00000565664 1104 ntBASIC4.1□□□□□ -1.75
CKS1BP61024 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC4.1□□□□□ -1.75
CKS1BP61024 AC133552.4-201ENST00000576103 676 ntBASIC4.1□□□□□ -1.75
CKS1BP61024 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC4.1□□□□□ -1.75
CKS1BP61024 AC087283.1-201ENST00000604029 1074 ntBASIC4.1□□□□□ -1.75
CKS1BP61024 AC073046.2-201ENST00000604756 527 ntBASIC4.1□□□□□ -1.75
CKS1BP61024 AL137000.1-201ENST00000610528 1244 ntBASIC4.1□□□□□ -1.75
CKS1BP61024 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
CKS1BP61024 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC4.1□□□□□ -1.75
CKS1BP61024 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CKS1BP61024 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
CKS1BP61024 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC4.1□□□□□ -1.75
CKS1BP61024 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
CKS1BP61024 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.1□□□□□ -1.75
CKS1BP61024 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
CKS1BP61024 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CKS1BP61024 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CKS1BP61024 ABCC13-202ENST00000463099 3842 ntBASIC4.1□□□□□ -1.75
CKS1BP61024 AC091046.3-201ENST00000631455 1574 ntBASIC4.1□□□□□ -1.75
CKS1BP61024 AC104623.2-202ENST00000623477 4002 ntBASIC4.1□□□□□ -1.75
CKS1BP61024 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CKS1BP61024 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CKS1BP61024 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CKS1BP61024 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.09□□□□□ -1.75
CKS1BP61024 SCN1A-220ENST00000641603 12506 ntBASIC4.09□□□□□ -1.75
CKS1BP61024 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CKS1BP61024 OR10J6P-201ENST00000289731 930 ntBASIC4.09□□□□□ -1.75
CKS1BP61024 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC4.09□□□□□ -1.75
CKS1BP61024 TPT1-204ENST00000379060 764 ntTSL 5 BASIC4.09□□□□□ -1.75
CKS1BP61024 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CKS1BP61024 EIF4A1P3-201ENST00000411521 244 ntBASIC4.09□□□□□ -1.75
CKS1BP61024 OR52N3P-201ENST00000413417 934 ntBASIC4.09□□□□□ -1.75
CKS1BP61024 AC083862.1-201ENST00000427378 1242 ntBASIC4.09□□□□□ -1.75
CKS1BP61024 PPIAP10-201ENST00000438675 458 ntBASIC4.09□□□□□ -1.75
CKS1BP61024 POU5F1P5-201ENST00000445059 658 ntBASIC4.09□□□□□ -1.75
CKS1BP61024 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC4.09□□□□□ -1.75
CKS1BP61024 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CKS1BP61024 AL162739.1-201ENST00000450606 307 ntBASIC4.09□□□□□ -1.75
CKS1BP61024 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC4.09□□□□□ -1.75
CKS1BP61024 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CKS1BP61024 RPS10P28-201ENST00000480396 498 ntBASIC4.09□□□□□ -1.75
CKS1BP61024 RPL23AP40-201ENST00000487630 390 ntBASIC4.09□□□□□ -1.75
CKS1BP61024 AC105391.1-201ENST00000503155 1045 ntBASIC4.09□□□□□ -1.75
CKS1BP61024 AC008945.1-201ENST00000505144 499 ntBASIC4.09□□□□□ -1.75
CKS1BP61024 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC4.09□□□□□ -1.75
CKS1BP61024 MINOS1P4-201ENST00000515470 318 ntBASIC4.09□□□□□ -1.75
CKS1BP61024 snoU109.5-201ENST00000516231 132 ntBASIC4.09□□□□□ -1.75
CKS1BP61024 NPM1P6-201ENST00000521088 871 ntBASIC4.09□□□□□ -1.75
CKS1BP61024 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CKS1BP61024 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC4.09□□□□□ -1.75
CKS1BP61024 AL049779.3-201ENST00000557141 606 ntBASIC4.09□□□□□ -1.75
CKS1BP61024 AC091078.2-201ENST00000557145 559 ntBASIC4.09□□□□□ -1.75
CKS1BP61024 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC4.09□□□□□ -1.75
CKS1BP61024 CD24P2-201ENST00000565486 219 ntBASIC4.09□□□□□ -1.75
CKS1BP61024 AP005119.2-201ENST00000579735 1105 ntBASIC4.09□□□□□ -1.75
CKS1BP61024 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.09□□□□□ -1.75
CKS1BP61024 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC4.09□□□□□ -1.75
CKS1BP61024 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC4.09□□□□□ -1.75
CKS1BP61024 AL353600.1-201ENST00000608148 251 ntBASIC4.09□□□□□ -1.75
CKS1BP61024 MIR8082-201ENST00000612488 81 ntBASIC4.09□□□□□ -1.75
CKS1BP61024 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC4.09□□□□□ -1.75
CKS1BP61024 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC4.09□□□□□ -1.75
CKS1BP61024 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.75
CKS1BP61024 AP002967.1-201ENST00000624203 539 ntBASIC4.09□□□□□ -1.75
CKS1BP61024 ASB8-218ENST00000629941 278 ntTSL 5 BASIC4.09□□□□□ -1.75
CKS1BP61024 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC4.09□□□□□ -1.75
CKS1BP61024 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
CKS1BP61024 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CKS1BP61024 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CKS1BP61024 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CKS1BP61024 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC4.09□□□□□ -1.76
CKS1BP61024 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CKS1BP61024 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC4.09□□□□□ -1.76
CKS1BP61024 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
CKS1BP61024 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.09□□□□□ -1.76
CKS1BP61024 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
CKS1BP61024 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC4.08□□□□□ -1.76
CKS1BP61024 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CKS1BP61024 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.08□□□□□ -1.76
CKS1BP61024 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CKS1BP61024 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CKS1BP61024 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CKS1BP61024 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CKS1BP61024 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CKS1BP61024 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CKS1BP61024 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.08□□□□□ -1.76
CKS1BP61024 RN7SKP128-201ENST00000364270 303 ntBASIC4.08□□□□□ -1.76
CKS1BP61024 RNA5SP485-201ENST00000365053 119 ntBASIC4.08□□□□□ -1.76
CKS1BP61024 RNA5SP223-201ENST00000365174 120 ntBASIC4.08□□□□□ -1.76
CKS1BP61024 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
CKS1BP61024 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CKS1BP61024 RPL11P3-201ENST00000395256 523 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms