Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 HMGB1P16-201ENST00000447155 540 ntBASIC6.3□□□□□ -1.4
GFRA1P56159 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC6.3□□□□□ -1.4
GFRA1P56159 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
GFRA1P56159 VN1R32P-201ENST00000452234 905 ntBASIC6.3□□□□□ -1.4
GFRA1P56159 AC010878.1-201ENST00000456500 1047 ntBASIC6.3□□□□□ -1.4
GFRA1P56159 AC110749.1-201ENST00000462007 357 ntBASIC6.3□□□□□ -1.4
GFRA1P56159 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
GFRA1P56159 RPL7P1-201ENST00000468161 747 ntBASIC6.3□□□□□ -1.4
GFRA1P56159 RPL7P9-201ENST00000468715 747 ntBASIC6.3□□□□□ -1.4
GFRA1P56159 AC069304.1-201ENST00000491593 704 ntBASIC6.3□□□□□ -1.4
GFRA1P56159 RN7SL569P-201ENST00000494652 288 ntBASIC6.3□□□□□ -1.4
GFRA1P56159 AC107401.1-201ENST00000503426 685 ntBASIC6.3□□□□□ -1.4
GFRA1P56159 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC6.3□□□□□ -1.4
GFRA1P56159 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC6.3□□□□□ -1.4
GFRA1P56159 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
GFRA1P56159 AC008868.1-201ENST00000509786 737 ntBASIC6.3□□□□□ -1.4
GFRA1P56159 AC010587.2-201ENST00000511727 448 ntBASIC6.3□□□□□ -1.4
GFRA1P56159 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC6.3□□□□□ -1.4
GFRA1P56159 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC6.3□□□□□ -1.4
GFRA1P56159 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.3□□□□□ -1.4
GFRA1P56159 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.3□□□□□ -1.4
GFRA1P56159 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC6.3□□□□□ -1.4
GFRA1P56159 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
GFRA1P56159 AC008759.1-201ENST00000589783 983 ntBASIC6.3□□□□□ -1.4
GFRA1P56159 EIF1P6-201ENST00000600054 334 ntBASIC6.3□□□□□ -1.4
GFRA1P56159 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.3□□□□□ -1.4
GFRA1P56159 AC095055.1-201ENST00000603472 1113 ntBASIC6.3□□□□□ -1.4
GFRA1P56159 AC092656.1-203ENST00000624134 423 ntBASIC6.3□□□□□ -1.4
GFRA1P56159 AP003072.4-201ENST00000624580 310 ntBASIC6.3□□□□□ -1.4
GFRA1P56159 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC6.3□□□□□ -1.4
GFRA1P56159 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC6.3□□□□□ -1.4
GFRA1P56159 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
GFRA1P56159 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
GFRA1P56159 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
GFRA1P56159 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
GFRA1P56159 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
GFRA1P56159 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
GFRA1P56159 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC6.3□□□□□ -1.4
GFRA1P56159 UGT2B25P-201ENST00000511504 1586 ntBASIC6.3□□□□□ -1.4
GFRA1P56159 AP002800.1-201ENST00000624982 2225 ntBASIC6.3□□□□□ -1.4
GFRA1P56159 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.3□□□□□ -1.4
GFRA1P56159 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
GFRA1P56159 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC6.3□□□□□ -1.4
GFRA1P56159 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
GFRA1P56159 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
GFRA1P56159 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
GFRA1P56159 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
GFRA1P56159 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
GFRA1P56159 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
GFRA1P56159 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
GFRA1P56159 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
GFRA1P56159 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
GFRA1P56159 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
GFRA1P56159 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC6.29□□□□□ -1.4
GFRA1P56159 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.29□□□□□ -1.4
GFRA1P56159 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.29□□□□□ -1.4
GFRA1P56159 AC004014.2-201ENST00000623718 5122 ntBASIC6.29□□□□□ -1.4
GFRA1P56159 AC009237.3-203ENST00000442128 3551 ntBASIC6.29□□□□□ -1.4
GFRA1P56159 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
GFRA1P56159 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
GFRA1P56159 AC023490.2-201ENST00000359859 470 ntBASIC6.29□□□□□ -1.4
GFRA1P56159 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
GFRA1P56159 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
GFRA1P56159 RN7SKP62-201ENST00000384539 329 ntBASIC6.29□□□□□ -1.4
GFRA1P56159 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
GFRA1P56159 RNA5SP176-201ENST00000390956 110 ntBASIC6.29□□□□□ -1.4
GFRA1P56159 AL356473.1-201ENST00000406203 1408 ntBASIC6.29□□□□□ -1.4
GFRA1P56159 AL034374.1-201ENST00000406329 351 ntBASIC6.29□□□□□ -1.4
GFRA1P56159 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.29□□□□□ -1.4
GFRA1P56159 OFD1P11Y-201ENST00000418213 1177 ntBASIC6.29□□□□□ -1.4
GFRA1P56159 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.29□□□□□ -1.4
GFRA1P56159 PTP4A1P1-201ENST00000420539 515 ntBASIC6.29□□□□□ -1.4
GFRA1P56159 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC6.29□□□□□ -1.4
GFRA1P56159 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
GFRA1P56159 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.29□□□□□ -1.4
GFRA1P56159 PARP4P1-201ENST00000435945 2337 ntBASIC6.29□□□□□ -1.4
GFRA1P56159 HMGN1P6-201ENST00000438508 291 ntBASIC6.29□□□□□ -1.4
GFRA1P56159 USP9YP22-201ENST00000438971 294 ntBASIC6.29□□□□□ -1.4
GFRA1P56159 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.29□□□□□ -1.4
GFRA1P56159 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
GFRA1P56159 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.29□□□□□ -1.4
GFRA1P56159 MTCO2P25-201ENST00000447065 681 ntBASIC6.29□□□□□ -1.4
GFRA1P56159 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC6.29□□□□□ -1.4
GFRA1P56159 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC6.29□□□□□ -1.4
GFRA1P56159 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
GFRA1P56159 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.29□□□□□ -1.4
GFRA1P56159 AL096803.1-201ENST00000456921 1021 ntBASIC6.29□□□□□ -1.4
GFRA1P56159 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.29□□□□□ -1.4
GFRA1P56159 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.29□□□□□ -1.4
GFRA1P56159 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
GFRA1P56159 PPP1R2P6-201ENST00000478565 588 ntBASIC6.29□□□□□ -1.4
GFRA1P56159 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
GFRA1P56159 AC117395.1-201ENST00000487390 403 ntBASIC6.29□□□□□ -1.4
GFRA1P56159 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC6.29□□□□□ -1.4
GFRA1P56159 SSX8-201ENST00000506270 579 ntBASIC6.29□□□□□ -1.4
GFRA1P56159 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.29□□□□□ -1.4
GFRA1P56159 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC6.29□□□□□ -1.4
GFRA1P56159 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.29□□□□□ -1.4
GFRA1P56159 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC6.29□□□□□ -1.4
GFRA1P56159 NPIPB14P-203ENST00000532298 987 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms