Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDH6P55285 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CDH6P55285 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDH6P55285 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.93□□□□□ -1.46
CDH6P55285 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.93□□□□□ -1.46
CDH6P55285 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.93□□□□□ -1.46
CDH6P55285 AC114774.1-201ENST00000507410 1770 ntBASIC5.93□□□□□ -1.46
CDH6P55285 OR4G1P-202ENST00000641173 1788 ntBASIC5.93□□□□□ -1.46
CDH6P55285 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.93□□□□□ -1.46
CDH6P55285 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CDH6P55285 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.92□□□□□ -1.46
CDH6P55285 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
CDH6P55285 AL034546.1-201ENST00000623740 3693 ntBASIC5.92□□□□□ -1.46
CDH6P55285 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDH6P55285 AC104964.3-201ENST00000606115 2860 ntBASIC5.92□□□□□ -1.46
CDH6P55285 AL159987.1-201ENST00000347911 293 ntBASIC5.92□□□□□ -1.46
CDH6P55285 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CDH6P55285 AC096921.1-201ENST00000411661 375 ntBASIC5.92□□□□□ -1.46
CDH6P55285 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.92□□□□□ -1.46
CDH6P55285 DPPA2P2-201ENST00000418220 897 ntBASIC5.92□□□□□ -1.46
CDH6P55285 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.92□□□□□ -1.46
CDH6P55285 AC117434.1-201ENST00000419971 836 ntBASIC5.92□□□□□ -1.46
CDH6P55285 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.92□□□□□ -1.46
CDH6P55285 DNAJA1P5-201ENST00000440278 943 ntBASIC5.92□□□□□ -1.46
CDH6P55285 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.92□□□□□ -1.46
CDH6P55285 RN7SL570P-201ENST00000484405 292 ntBASIC5.92□□□□□ -1.46
CDH6P55285 AC073610.1-201ENST00000489971 396 ntBASIC5.92□□□□□ -1.46
CDH6P55285 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.92□□□□□ -1.46
CDH6P55285 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.92□□□□□ -1.46
CDH6P55285 RNA5SP271-201ENST00000516700 88 ntBASIC5.92□□□□□ -1.46
CDH6P55285 AC137627.1-201ENST00000545761 289 ntBASIC5.92□□□□□ -1.46
CDH6P55285 AGGF1P7-201ENST00000562369 913 ntBASIC5.92□□□□□ -1.46
CDH6P55285 AC092121.1-201ENST00000569452 202 ntBASIC5.92□□□□□ -1.46
CDH6P55285 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.92□□□□□ -1.46
CDH6P55285 DHFRP1-201ENST00000579682 559 ntBASIC5.92□□□□□ -1.46
CDH6P55285 AC090607.5-201ENST00000615692 224 ntBASIC5.92□□□□□ -1.46
CDH6P55285 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDH6P55285 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.92□□□□□ -1.46
CDH6P55285 AC129915.3-201ENST00000634128 948 ntBASIC5.92□□□□□ -1.46
CDH6P55285 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CDH6P55285 OR8G3P-202ENST00000641572 1255 ntBASIC5.92□□□□□ -1.46
CDH6P55285 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CDH6P55285 WDR95P-201ENST00000425638 1542 ntBASIC5.92□□□□□ -1.46
CDH6P55285 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDH6P55285 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
CDH6P55285 UGT2B24P-201ENST00000514441 1597 ntBASIC5.92□□□□□ -1.46
CDH6P55285 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CDH6P55285 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.92□□□□□ -1.46
CDH6P55285 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.92□□□□□ -1.46
CDH6P55285 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
CDH6P55285 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
CDH6P55285 AC232271.1-201ENST00000602455 2715 ntBASIC5.91□□□□□ -1.46
CDH6P55285 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDH6P55285 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
CDH6P55285 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDH6P55285 OR7E25P-201ENST00000344844 931 ntBASIC5.91□□□□□ -1.46
CDH6P55285 OR7E101P-201ENST00000400428 513 ntBASIC5.91□□□□□ -1.46
CDH6P55285 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CDH6P55285 REREP1Y-201ENST00000422655 198 ntBASIC5.91□□□□□ -1.46
CDH6P55285 REREP2Y-201ENST00000439103 200 ntBASIC5.91□□□□□ -1.46
CDH6P55285 HMGN1P2-201ENST00000445197 310 ntBASIC5.91□□□□□ -1.46
CDH6P55285 OR52E7P-201ENST00000452394 933 ntBASIC5.91□□□□□ -1.46
CDH6P55285 HLA-DPA3-207ENST00000454398 229 ntBASIC5.91□□□□□ -1.46
CDH6P55285 RPSAP37-201ENST00000470913 821 ntBASIC5.91□□□□□ -1.46
CDH6P55285 RPS17P15-201ENST00000475609 349 ntBASIC5.91□□□□□ -1.46
CDH6P55285 RN7SL284P-201ENST00000498823 275 ntBASIC5.91□□□□□ -1.46
CDH6P55285 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.91□□□□□ -1.46
CDH6P55285 AC026782.2-201ENST00000510845 636 ntBASIC5.91□□□□□ -1.46
CDH6P55285 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.91□□□□□ -1.46
CDH6P55285 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.91□□□□□ -1.46
CDH6P55285 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.91□□□□□ -1.46
CDH6P55285 OR8Q1P-201ENST00000526467 655 ntBASIC5.91□□□□□ -1.46
CDH6P55285 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.91□□□□□ -1.46
CDH6P55285 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.91□□□□□ -1.46
CDH6P55285 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.91□□□□□ -1.46
CDH6P55285 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.91□□□□□ -1.46
CDH6P55285 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.91□□□□□ -1.46
CDH6P55285 AL096712.1-201ENST00000614561 159 ntBASIC5.91□□□□□ -1.46
CDH6P55285 AC015712.7-201ENST00000615211 635 ntBASIC5.91□□□□□ -1.46
CDH6P55285 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDH6P55285 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
CDH6P55285 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDH6P55285 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.91□□□□□ -1.46
CDH6P55285 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CDH6P55285 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.91□□□□□ -1.46
CDH6P55285 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
CDH6P55285 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDH6P55285 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDH6P55285 NEPNP-201ENST00000404786 1371 ntBASIC5.91□□□□□ -1.46
CDH6P55285 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDH6P55285 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDH6P55285 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
CDH6P55285 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
CDH6P55285 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
CDH6P55285 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CDH6P55285 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
CDH6P55285 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.9□□□□□ -1.46
CDH6P55285 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CDH6P55285 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.9□□□□□ -1.46
CDH6P55285 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 174.6 ms