Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 HMGB1P47-201ENST00000511281 589 ntBASIC7.55□□□□□ -1.2
USP11P51784 RNU6-720P-201ENST00000516363 108 ntBASIC7.55□□□□□ -1.2
USP11P51784 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC7.55□□□□□ -1.2
USP11P51784 MTND4LP26-201ENST00000518144 282 ntBASIC7.55□□□□□ -1.2
USP11P51784 AC020937.1-201ENST00000519677 1013 ntBASIC7.55□□□□□ -1.2
USP11P51784 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7.55□□□□□ -1.2
USP11P51784 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC7.55□□□□□ -1.2
USP11P51784 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
USP11P51784 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC7.55□□□□□ -1.2
USP11P51784 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC7.55□□□□□ -1.2
USP11P51784 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
USP11P51784 RAB30-209ENST00000532548 644 ntTSL 3 BASIC7.55□□□□□ -1.2
USP11P51784 NOP56P3-201ENST00000549457 385 ntBASIC7.55□□□□□ -1.2
USP11P51784 AL133241.1-201ENST00000556832 487 ntBASIC7.55□□□□□ -1.2
USP11P51784 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC7.55□□□□□ -1.2
USP11P51784 AL049840.5-201ENST00000602827 552 ntBASIC7.55□□□□□ -1.2
USP11P51784 AC012175.1-201ENST00000603755 531 ntBASIC7.55□□□□□ -1.2
USP11P51784 AC010738.1-201ENST00000604970 987 ntBASIC7.55□□□□□ -1.2
USP11P51784 AC024589.2-201ENST00000605642 1294 ntBASIC7.55□□□□□ -1.2
USP11P51784 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC7.55□□□□□ -1.2
USP11P51784 AC093635.1-201ENST00000609028 555 ntBASIC7.55□□□□□ -1.2
USP11P51784 AC131235.4-201ENST00000609288 620 ntBASIC7.55□□□□□ -1.2
USP11P51784 MIR6885-201ENST00000612241 66 ntBASIC7.55□□□□□ -1.2
USP11P51784 OSTC-205ENST00000613215 876 ntTSL 2 BASIC7.55□□□□□ -1.2
USP11P51784 AC105227.2-201ENST00000615075 605 ntBASIC7.55□□□□□ -1.2
USP11P51784 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC7.55□□□□□ -1.2
USP11P51784 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC7.55□□□□□ -1.2
USP11P51784 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
USP11P51784 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC7.55□□□□□ -1.2
USP11P51784 GMFB-210ENST00000628554 639 ntTSL 4 BASIC7.55□□□□□ -1.2
USP11P51784 AC244258.1-201ENST00000637553 1071 ntBASIC7.55□□□□□ -1.2
USP11P51784 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
USP11P51784 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
USP11P51784 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
USP11P51784 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
USP11P51784 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
USP11P51784 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
USP11P51784 AC105114.1-201ENST00000624795 1862 ntBASIC7.55□□□□□ -1.2
USP11P51784 AC087565.3-202ENST00000642085 1603 ntBASIC7.55□□□□□ -1.2
USP11P51784 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC7.55□□□□□ -1.2
USP11P51784 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
USP11P51784 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
USP11P51784 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
USP11P51784 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC7.55□□□□□ -1.2
USP11P51784 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
USP11P51784 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
USP11P51784 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
USP11P51784 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
USP11P51784 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC7.54□□□□□ -1.2
USP11P51784 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
USP11P51784 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC7.54□□□□□ -1.2
USP11P51784 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
USP11P51784 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
USP11P51784 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.54□□□□□ -1.2
USP11P51784 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
USP11P51784 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.54□□□□□ -1.2
USP11P51784 RNU6-1283P-201ENST00000365314 105 ntBASIC7.54□□□□□ -1.2
USP11P51784 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC7.54□□□□□ -1.2
USP11P51784 SNORA7A-201ENST00000384765 139 ntBASIC7.54□□□□□ -1.2
USP11P51784 RPL12P23-201ENST00000405880 490 ntBASIC7.54□□□□□ -1.2
USP11P51784 AL445183.3-201ENST00000414168 502 ntBASIC7.54□□□□□ -1.2
USP11P51784 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
USP11P51784 RPF2P1-201ENST00000424137 906 ntBASIC7.54□□□□□ -1.2
USP11P51784 AC124944.2-201ENST00000429866 1242 ntBASIC7.54□□□□□ -1.2
USP11P51784 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
USP11P51784 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC7.54□□□□□ -1.2
USP11P51784 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC7.54□□□□□ -1.2
USP11P51784 COL11A2P1-205ENST00000441798 676 ntBASIC7.54□□□□□ -1.2
USP11P51784 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC7.54□□□□□ -1.2
USP11P51784 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
USP11P51784 RPL7P41-201ENST00000485823 957 ntBASIC7.54□□□□□ -1.2
USP11P51784 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC7.54□□□□□ -1.2
USP11P51784 MRPL57P6-201ENST00000506570 309 ntBASIC7.54□□□□□ -1.2
USP11P51784 AC096754.1-201ENST00000508904 818 ntBASIC7.54□□□□□ -1.2
USP11P51784 AC083906.1-201ENST00000509298 406 ntBASIC7.54□□□□□ -1.2
USP11P51784 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC7.54□□□□□ -1.2
USP11P51784 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC7.54□□□□□ -1.2
USP11P51784 RNU6ATAC39P-201ENST00000516309 149 ntBASIC7.54□□□□□ -1.2
USP11P51784 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
USP11P51784 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC7.54□□□□□ -1.2
USP11P51784 TBCA-209ENST00000522370 435 ntTSL 3 BASIC7.54□□□□□ -1.2
USP11P51784 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC7.54□□□□□ -1.2
USP11P51784 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC7.54□□□□□ -1.2
USP11P51784 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC7.54□□□□□ -1.2
USP11P51784 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC7.54□□□□□ -1.2
USP11P51784 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC7.54□□□□□ -1.2
USP11P51784 AC090115.2-201ENST00000548060 883 ntBASIC7.54□□□□□ -1.2
USP11P51784 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC7.54□□□□□ -1.2
USP11P51784 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
USP11P51784 AL162632.2-201ENST00000553933 399 ntBASIC7.54□□□□□ -1.2
USP11P51784 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC7.54□□□□□ -1.2
USP11P51784 AL121834.1-201ENST00000572284 509 ntBASIC7.54□□□□□ -1.2
USP11P51784 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC7.54□□□□□ -1.2
USP11P51784 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC7.54□□□□□ -1.2
USP11P51784 AC024267.2-201ENST00000582737 417 ntBASIC7.54□□□□□ -1.2
USP11P51784 AC083760.1-201ENST00000589621 670 ntBASIC7.54□□□□□ -1.2
USP11P51784 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC7.54□□□□□ -1.2
USP11P51784 MTND3P19-201ENST00000603825 345 ntBASIC7.54□□□□□ -1.2
USP11P51784 AL139286.2-201ENST00000606838 396 ntBASIC7.54□□□□□ -1.2
USP11P51784 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms