Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PTPN9P43378 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PTPN9P43378 FAM60CP-201ENST00000591086 664 ntBASIC6.15□□□□□ -1.42
PTPN9P43378 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.15□□□□□ -1.42
PTPN9P43378 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.15□□□□□ -1.42
PTPN9P43378 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.15□□□□□ -1.42
PTPN9P43378 AC092953.2-201ENST00000608000 699 ntBASIC6.15□□□□□ -1.42
PTPN9P43378 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.15□□□□□ -1.42
PTPN9P43378 AL162233.1-201ENST00000620014 944 ntBASIC6.15□□□□□ -1.42
PTPN9P43378 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.15□□□□□ -1.42
PTPN9P43378 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.15□□□□□ -1.42
PTPN9P43378 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PTPN9P43378 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PTPN9P43378 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
PTPN9P43378 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
PTPN9P43378 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
PTPN9P43378 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PTPN9P43378 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.15□□□□□ -1.43
PTPN9P43378 IFIT1P1-201ENST00000400497 1449 ntBASIC6.15□□□□□ -1.43
PTPN9P43378 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
PTPN9P43378 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
PTPN9P43378 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.15□□□□□ -1.43
PTPN9P43378 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
PTPN9P43378 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
PTPN9P43378 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PTPN9P43378 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PTPN9P43378 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
PTPN9P43378 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
PTPN9P43378 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PTPN9P43378 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.14□□□□□ -1.43
PTPN9P43378 AL513548.1-201ENST00000562904 1724 ntBASIC6.14□□□□□ -1.43
PTPN9P43378 AL161912.4-201ENST00000623889 2468 ntBASIC6.14□□□□□ -1.43
PTPN9P43378 CUL4AP1-201ENST00000514750 1863 ntBASIC6.14□□□□□ -1.43
PTPN9P43378 RN7SKP186-201ENST00000365371 303 ntBASIC6.14□□□□□ -1.43
PTPN9P43378 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
PTPN9P43378 RNU2-18P-201ENST00000411224 162 ntBASIC6.14□□□□□ -1.43
PTPN9P43378 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.14□□□□□ -1.43
PTPN9P43378 SETP9-201ENST00000423837 832 ntBASIC6.14□□□□□ -1.43
PTPN9P43378 ZFAND6P1-201ENST00000434138 605 ntBASIC6.14□□□□□ -1.43
PTPN9P43378 DNAJC19P5-201ENST00000443295 316 ntBASIC6.14□□□□□ -1.43
PTPN9P43378 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC6.14□□□□□ -1.43
PTPN9P43378 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.14□□□□□ -1.43
PTPN9P43378 AL157777.1-201ENST00000468100 304 ntBASIC6.14□□□□□ -1.43
PTPN9P43378 AL122020.1-201ENST00000472287 459 ntBASIC6.14□□□□□ -1.43
PTPN9P43378 AC079080.1-201ENST00000479841 822 ntBASIC6.14□□□□□ -1.43
PTPN9P43378 AC025458.1-201ENST00000506046 166 ntBASIC6.14□□□□□ -1.43
PTPN9P43378 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PTPN9P43378 AC078899.1-201ENST00000521432 1185 ntBASIC6.14□□□□□ -1.43
PTPN9P43378 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.14□□□□□ -1.43
PTPN9P43378 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.14□□□□□ -1.43
PTPN9P43378 AC012414.2-201ENST00000559474 187 ntBASIC6.14□□□□□ -1.43
PTPN9P43378 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.14□□□□□ -1.43
PTPN9P43378 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.14□□□□□ -1.43
PTPN9P43378 MIR4420-201ENST00000583944 77 ntBASIC6.14□□□□□ -1.43
PTPN9P43378 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.14□□□□□ -1.43
PTPN9P43378 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.14□□□□□ -1.43
PTPN9P43378 OR7M1P-201ENST00000608946 533 ntBASIC6.14□□□□□ -1.43
PTPN9P43378 AL391262.2-201ENST00000622466 494 ntBASIC6.14□□□□□ -1.43
PTPN9P43378 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.14□□□□□ -1.43
PTPN9P43378 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.14□□□□□ -1.43
PTPN9P43378 AP000550.3-201ENST00000637734 379 ntBASIC6.14□□□□□ -1.43
PTPN9P43378 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.14□□□□□ -1.43
PTPN9P43378 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.14□□□□□ -1.43
PTPN9P43378 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
PTPN9P43378 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PTPN9P43378 AL592429.1-201ENST00000403909 1473 ntBASIC6.14□□□□□ -1.43
PTPN9P43378 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.14□□□□□ -1.43
PTPN9P43378 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.14□□□□□ -1.43
PTPN9P43378 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PTPN9P43378 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PTPN9P43378 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PTPN9P43378 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PTPN9P43378 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
PTPN9P43378 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PTPN9P43378 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.13□□□□□ -1.43
PTPN9P43378 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
PTPN9P43378 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.13□□□□□ -1.43
PTPN9P43378 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTPN9P43378 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTPN9P43378 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PTPN9P43378 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
PTPN9P43378 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTPN9P43378 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTPN9P43378 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTPN9P43378 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTPN9P43378 RNA5SP273-201ENST00000362484 113 ntBASIC6.13□□□□□ -1.43
PTPN9P43378 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
PTPN9P43378 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.13□□□□□ -1.43
PTPN9P43378 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.13□□□□□ -1.43
PTPN9P43378 AC013470.3-201ENST00000420252 1194 ntBASIC6.13□□□□□ -1.43
PTPN9P43378 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.13□□□□□ -1.43
PTPN9P43378 KRT8P51-201ENST00000438938 274 ntBASIC6.13□□□□□ -1.43
PTPN9P43378 RSU1P1-201ENST00000453416 441 ntBASIC6.13□□□□□ -1.43
PTPN9P43378 C1DP3-201ENST00000455013 423 ntBASIC6.13□□□□□ -1.43
PTPN9P43378 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.13□□□□□ -1.43
PTPN9P43378 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.13□□□□□ -1.43
PTPN9P43378 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC6.13□□□□□ -1.43
PTPN9P43378 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC6.13□□□□□ -1.43
PTPN9P43378 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC6.13□□□□□ -1.43
PTPN9P43378 WBP1LP3-201ENST00000523033 208 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms