Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SSR1P43307 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
SSR1P43307 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC6.25□□□□□ -1.41
SSR1P43307 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SSR1P43307 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.25□□□□□ -1.41
SSR1P43307 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SSR1P43307 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
SSR1P43307 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSR1P43307 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.24□□□□□ -1.41
SSR1P43307 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SSR1P43307 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
SSR1P43307 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC6.24□□□□□ -1.41
SSR1P43307 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
SSR1P43307 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
SSR1P43307 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.24□□□□□ -1.41
SSR1P43307 RBMY1HP-201ENST00000382759 1389 ntBASIC6.24□□□□□ -1.41
SSR1P43307 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.24□□□□□ -1.41
SSR1P43307 MAPK10-328ENST00000641553 4009 ntBASIC6.24□□□□□ -1.41
SSR1P43307 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSR1P43307 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
SSR1P43307 RN7SKP247-201ENST00000411094 308 ntBASIC6.24□□□□□ -1.41
SSR1P43307 THEM7P-201ENST00000419556 672 ntBASIC6.24□□□□□ -1.41
SSR1P43307 AC099677.3-201ENST00000427081 395 ntBASIC6.24□□□□□ -1.41
SSR1P43307 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.24□□□□□ -1.41
SSR1P43307 AL590399.2-201ENST00000427536 309 ntBASIC6.24□□□□□ -1.41
SSR1P43307 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.24□□□□□ -1.41
SSR1P43307 AL353662.1-201ENST00000439099 327 ntBASIC6.24□□□□□ -1.41
SSR1P43307 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SSR1P43307 RPL5P25-201ENST00000441148 775 ntBASIC6.24□□□□□ -1.41
SSR1P43307 AP000942.1-201ENST00000463969 747 ntBASIC6.24□□□□□ -1.41
SSR1P43307 RN7SL836P-201ENST00000476140 296 ntBASIC6.24□□□□□ -1.41
SSR1P43307 OR9N1P-201ENST00000491296 333 ntBASIC6.24□□□□□ -1.41
SSR1P43307 RN7SL362P-201ENST00000494228 267 ntBASIC6.24□□□□□ -1.41
SSR1P43307 AC106822.1-201ENST00000502647 526 ntBASIC6.24□□□□□ -1.41
SSR1P43307 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.24□□□□□ -1.41
SSR1P43307 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.24□□□□□ -1.41
SSR1P43307 AP003033.2-201ENST00000528901 805 ntBASIC6.24□□□□□ -1.41
SSR1P43307 AC244502.2-201ENST00000543361 851 ntBASIC6.24□□□□□ -1.41
SSR1P43307 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.24□□□□□ -1.41
SSR1P43307 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.24□□□□□ -1.41
SSR1P43307 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.24□□□□□ -1.41
SSR1P43307 AL359219.2-201ENST00000555184 348 ntBASIC6.24□□□□□ -1.41
SSR1P43307 NPM1P42-201ENST00000560329 862 ntBASIC6.24□□□□□ -1.41
SSR1P43307 AC027216.1-201ENST00000577726 685 ntBASIC6.24□□□□□ -1.41
SSR1P43307 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.24□□□□□ -1.41
SSR1P43307 AC005224.3-201ENST00000584683 2140 ntBASIC6.24□□□□□ -1.41
SSR1P43307 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.24□□□□□ -1.41
SSR1P43307 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.24□□□□□ -1.41
SSR1P43307 AL021918.2-201ENST00000613415 194 ntBASIC6.24□□□□□ -1.41
SSR1P43307 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSR1P43307 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC6.24□□□□□ -1.41
SSR1P43307 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSR1P43307 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
SSR1P43307 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSR1P43307 KYNUP3-201ENST00000574386 1341 ntBASIC6.24□□□□□ -1.41
SSR1P43307 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSR1P43307 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SSR1P43307 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SSR1P43307 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.23□□□□□ -1.41
SSR1P43307 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SSR1P43307 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SSR1P43307 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.23□□□□□ -1.41
SSR1P43307 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SSR1P43307 RNA5SP232-201ENST00000364144 119 ntBASIC6.23□□□□□ -1.41
SSR1P43307 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.23□□□□□ -1.41
SSR1P43307 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
SSR1P43307 GCNT1P4-201ENST00000404096 329 ntBASIC6.23□□□□□ -1.41
SSR1P43307 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.23□□□□□ -1.41
SSR1P43307 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.23□□□□□ -1.41
SSR1P43307 MTND6P12-201ENST00000428247 522 ntBASIC6.23□□□□□ -1.41
SSR1P43307 USP24P1-201ENST00000433802 779 ntBASIC6.23□□□□□ -1.41
SSR1P43307 AL450263.2-201ENST00000439400 589 ntBASIC6.23□□□□□ -1.41
SSR1P43307 AL663074.2-201ENST00000440621 479 ntBASIC6.23□□□□□ -1.41
SSR1P43307 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.23□□□□□ -1.41
SSR1P43307 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.23□□□□□ -1.41
SSR1P43307 AC098847.1-201ENST00000473094 348 ntBASIC6.23□□□□□ -1.41
SSR1P43307 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.23□□□□□ -1.41
SSR1P43307 snoU109.5-201ENST00000516231 132 ntBASIC6.23□□□□□ -1.41
SSR1P43307 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.23□□□□□ -1.41
SSR1P43307 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.23□□□□□ -1.41
SSR1P43307 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.23□□□□□ -1.41
SSR1P43307 AC121758.1-202ENST00000556917 658 ntBASIC6.23□□□□□ -1.41
SSR1P43307 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.23□□□□□ -1.41
SSR1P43307 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.23□□□□□ -1.41
SSR1P43307 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.23□□□□□ -1.41
SSR1P43307 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.23□□□□□ -1.41
SSR1P43307 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.23□□□□□ -1.41
SSR1P43307 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.23□□□□□ -1.41
SSR1P43307 AP001005.3-201ENST00000622049 129 ntBASIC6.23□□□□□ -1.41
SSR1P43307 AL357562.1-201ENST00000624911 609 ntBASIC6.23□□□□□ -1.41
SSR1P43307 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
SSR1P43307 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
SSR1P43307 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.23□□□□□ -1.41
SSR1P43307 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SSR1P43307 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.23□□□□□ -1.41
SSR1P43307 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SSR1P43307 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC6.23□□□□□ -1.41
SSR1P43307 AL138820.1-201ENST00000617901 5305 ntBASIC6.23□□□□□ -1.41
SSR1P43307 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.22□□□□□ -1.41
SSR1P43307 AC130304.1-201ENST00000622942 2385 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms