Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AC108751.3-201ENST00000461814 1020 ntBASIC5.74□□□□□ -1.49
HMGCLP35914 RPS23P2-201ENST00000463671 415 ntBASIC5.74□□□□□ -1.49
HMGCLP35914 AC022215.1-201ENST00000481770 362 ntBASIC5.74□□□□□ -1.49
HMGCLP35914 NPM1P21-201ENST00000513394 762 ntBASIC5.74□□□□□ -1.49
HMGCLP35914 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.74□□□□□ -1.49
HMGCLP35914 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.74□□□□□ -1.49
HMGCLP35914 RN7SL544P-201ENST00000617232 284 ntBASIC5.74□□□□□ -1.49
HMGCLP35914 RN7SL763P-201ENST00000620922 284 ntBASIC5.74□□□□□ -1.49
HMGCLP35914 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
HMGCLP35914 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.74□□□□□ -1.49
HMGCLP35914 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.74□□□□□ -1.49
HMGCLP35914 AL137141.1-201ENST00000624622 4836 ntBASIC5.74□□□□□ -1.49
HMGCLP35914 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.74□□□□□ -1.49
HMGCLP35914 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.74□□□□□ -1.49
HMGCLP35914 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
HMGCLP35914 AC106872.5-201ENST00000508856 1416 ntBASIC5.74□□□□□ -1.49
HMGCLP35914 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.73□□□□□ -1.49
HMGCLP35914 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMGCLP35914 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMGCLP35914 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.73□□□□□ -1.49
HMGCLP35914 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.73□□□□□ -1.49
HMGCLP35914 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HMGCLP35914 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMGCLP35914 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.73□□□□□ -1.49
HMGCLP35914 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.73□□□□□ -1.49
HMGCLP35914 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.73□□□□□ -1.49
HMGCLP35914 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.73□□□□□ -1.49
HMGCLP35914 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
HMGCLP35914 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.73□□□□□ -1.49
HMGCLP35914 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
HMGCLP35914 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
HMGCLP35914 AL159987.1-201ENST00000347911 293 ntBASIC5.73□□□□□ -1.49
HMGCLP35914 MIR130A-201ENST00000385274 89 ntBASIC5.73□□□□□ -1.49
HMGCLP35914 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
HMGCLP35914 MIR1282-201ENST00000408865 101 ntBASIC5.73□□□□□ -1.49
HMGCLP35914 EEF1B2P8-201ENST00000414101 671 ntBASIC5.73□□□□□ -1.49
HMGCLP35914 METTL15P3-201ENST00000415522 1221 ntBASIC5.73□□□□□ -1.49
HMGCLP35914 AL590399.2-201ENST00000427536 309 ntBASIC5.73□□□□□ -1.49
HMGCLP35914 KCTD9P1-201ENST00000430462 1167 ntBASIC5.73□□□□□ -1.49
HMGCLP35914 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.73□□□□□ -1.49
HMGCLP35914 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HMGCLP35914 RPSAP37-201ENST00000470913 821 ntBASIC5.73□□□□□ -1.49
HMGCLP35914 RPL32P33-201ENST00000487023 394 ntBASIC5.73□□□□□ -1.49
HMGCLP35914 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.73□□□□□ -1.49
HMGCLP35914 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HMGCLP35914 AP004609.2-201ENST00000532177 190 ntBASIC5.73□□□□□ -1.49
HMGCLP35914 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMGCLP35914 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.73□□□□□ -1.49
HMGCLP35914 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.73□□□□□ -1.49
HMGCLP35914 AP001496.3-201ENST00000580230 913 ntBASIC5.73□□□□□ -1.49
HMGCLP35914 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.73□□□□□ -1.49
HMGCLP35914 AC027243.2-201ENST00000602530 724 ntBASIC5.73□□□□□ -1.49
HMGCLP35914 AC100767.2-201ENST00000604840 693 ntBASIC5.73□□□□□ -1.49
HMGCLP35914 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.73□□□□□ -1.49
HMGCLP35914 AC093388.1-201ENST00000609166 430 ntBASIC5.73□□□□□ -1.49
HMGCLP35914 AC090607.5-201ENST00000615692 224 ntBASIC5.73□□□□□ -1.49
HMGCLP35914 AL035661.1-201ENST00000620459 1144 ntBASIC5.73□□□□□ -1.49
HMGCLP35914 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HMGCLP35914 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.73□□□□□ -1.49
HMGCLP35914 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMGCLP35914 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.73□□□□□ -1.49
HMGCLP35914 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.73□□□□□ -1.49
HMGCLP35914 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
HMGCLP35914 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HMGCLP35914 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HMGCLP35914 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
HMGCLP35914 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
HMGCLP35914 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.73□□□□□ -1.49
HMGCLP35914 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
HMGCLP35914 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMGCLP35914 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMGCLP35914 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMGCLP35914 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMGCLP35914 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.72□□□□□ -1.49
HMGCLP35914 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMGCLP35914 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMGCLP35914 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.72□□□□□ -1.49
HMGCLP35914 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMGCLP35914 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
HMGCLP35914 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.72□□□□□ -1.49
HMGCLP35914 AKR1B10P1-201ENST00000425765 942 ntBASIC5.72□□□□□ -1.49
HMGCLP35914 AC127526.2-201ENST00000426436 775 ntBASIC5.72□□□□□ -1.49
HMGCLP35914 HMGB3P24-201ENST00000433260 622 ntBASIC5.72□□□□□ -1.49
HMGCLP35914 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.72□□□□□ -1.49
HMGCLP35914 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.72□□□□□ -1.49
HMGCLP35914 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.72□□□□□ -1.49
HMGCLP35914 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.72□□□□□ -1.49
HMGCLP35914 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.72□□□□□ -1.49
HMGCLP35914 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.72□□□□□ -1.49
HMGCLP35914 snoU13.29-201ENST00000459370 104 ntBASIC5.72□□□□□ -1.49
HMGCLP35914 RPS3AP15-201ENST00000483874 781 ntBASIC5.72□□□□□ -1.49
HMGCLP35914 AC090058.1-201ENST00000498788 435 ntBASIC5.72□□□□□ -1.49
HMGCLP35914 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.72□□□□□ -1.49
HMGCLP35914 ST13P12-201ENST00000508958 1094 ntBASIC5.72□□□□□ -1.49
HMGCLP35914 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.72□□□□□ -1.49
HMGCLP35914 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.72□□□□□ -1.49
HMGCLP35914 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.72□□□□□ -1.49
HMGCLP35914 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.72□□□□□ -1.49
HMGCLP35914 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.72□□□□□ -1.49
HMGCLP35914 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms