Protein–RNA interactions for Protein: P12109

COL6A1, Collagen alpha-1(VI) chain, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1P12109 BX284632.2-201ENST00000421091 399 ntBASIC7.03□□□□□ -1.28
COL6A1P12109 Z68868.1-201ENST00000429048 544 ntBASIC7.03□□□□□ -1.28
COL6A1P12109 ELOCP3-201ENST00000439303 348 ntBASIC7.03□□□□□ -1.28
COL6A1P12109 SNRPFP2-201ENST00000440710 251 ntBASIC7.03□□□□□ -1.28
COL6A1P12109 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC7.03□□□□□ -1.28
COL6A1P12109 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC7.03□□□□□ -1.28
COL6A1P12109 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC7.03□□□□□ -1.28
COL6A1P12109 AC005077.1-201ENST00000449226 375 ntBASIC7.03□□□□□ -1.28
COL6A1P12109 RSU1P1-201ENST00000453416 441 ntBASIC7.03□□□□□ -1.28
COL6A1P12109 C1DP3-201ENST00000455013 423 ntBASIC7.03□□□□□ -1.28
COL6A1P12109 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC7.03□□□□□ -1.28
COL6A1P12109 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL6A1P12109 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC7.03□□□□□ -1.28
COL6A1P12109 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC7.03□□□□□ -1.28
COL6A1P12109 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC7.03□□□□□ -1.28
COL6A1P12109 RNU6-334P-201ENST00000517072 102 ntBASIC7.03□□□□□ -1.28
COL6A1P12109 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.28
COL6A1P12109 AC112191.2-201ENST00000522428 333 ntBASIC7.03□□□□□ -1.28
COL6A1P12109 AP000648.1-201ENST00000529682 397 ntBASIC7.03□□□□□ -1.28
COL6A1P12109 AC125611.1-201ENST00000549563 229 ntBASIC7.03□□□□□ -1.28
COL6A1P12109 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC7.03□□□□□ -1.28
COL6A1P12109 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC7.03□□□□□ -1.28
COL6A1P12109 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC7.03□□□□□ -1.28
COL6A1P12109 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC7.03□□□□□ -1.28
COL6A1P12109 AP005119.1-201ENST00000580956 292 ntBASIC7.03□□□□□ -1.28
COL6A1P12109 MIR1273E-201ENST00000581165 102 ntBASIC7.03□□□□□ -1.28
COL6A1P12109 AP001357.1-201ENST00000586304 1053 ntBASIC7.03□□□□□ -1.28
COL6A1P12109 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC7.03□□□□□ -1.28
COL6A1P12109 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC7.03□□□□□ -1.28
COL6A1P12109 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC7.03□□□□□ -1.28
COL6A1P12109 BUB1P1-201ENST00000603541 607 ntBASIC7.03□□□□□ -1.28
COL6A1P12109 AC069304.3-201ENST00000603938 1084 ntBASIC7.03□□□□□ -1.28
COL6A1P12109 AL031601.1-201ENST00000605702 394 ntBASIC7.03□□□□□ -1.28
COL6A1P12109 AC211433.2-201ENST00000608433 387 ntBASIC7.03□□□□□ -1.28
COL6A1P12109 OR7M1P-201ENST00000608946 533 ntBASIC7.03□□□□□ -1.28
COL6A1P12109 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.03□□□□□ -1.28
COL6A1P12109 MIR6793-201ENST00000612376 63 ntBASIC7.03□□□□□ -1.28
COL6A1P12109 AL355493.4-201ENST00000618530 292 ntBASIC7.03□□□□□ -1.28
COL6A1P12109 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC7.03□□□□□ -1.28
COL6A1P12109 AC068880.4-201ENST00000623082 495 ntBASIC7.03□□□□□ -1.28
COL6A1P12109 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC7.03□□□□□ -1.28
COL6A1P12109 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC7.03□□□□□ -1.28
COL6A1P12109 AC132825.7-201ENST00000638744 335 ntBASIC7.03□□□□□ -1.28
COL6A1P12109 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
COL6A1P12109 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL6A1P12109 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL6A1P12109 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7.03□□□□□ -1.28
COL6A1P12109 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL6A1P12109 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL6A1P12109 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
COL6A1P12109 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL6A1P12109 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL6A1P12109 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC7.03□□□□□ -1.28
COL6A1P12109 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.03□□□□□ -1.28
COL6A1P12109 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC7.03□□□□□ -1.28
COL6A1P12109 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
COL6A1P12109 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
COL6A1P12109 AC007993.1-201ENST00000621298 2430 ntBASIC7.02□□□□□ -1.28
COL6A1P12109 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
COL6A1P12109 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
COL6A1P12109 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL6A1P12109 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
COL6A1P12109 CTAGE11P-201ENST00000451540 2353 ntBASIC7.02□□□□□ -1.29
COL6A1P12109 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL6A1P12109 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
COL6A1P12109 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL6A1P12109 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL6A1P12109 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL6A1P12109 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
COL6A1P12109 OR9K1P-201ENST00000326513 941 ntBASIC7.02□□□□□ -1.29
COL6A1P12109 RNU1-134P-201ENST00000362935 165 ntBASIC7.02□□□□□ -1.29
COL6A1P12109 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC7.02□□□□□ -1.29
COL6A1P12109 RNU6-152P-201ENST00000384037 107 ntBASIC7.02□□□□□ -1.29
COL6A1P12109 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
COL6A1P12109 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC7.02□□□□□ -1.29
COL6A1P12109 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC7.02□□□□□ -1.29
COL6A1P12109 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC7.02□□□□□ -1.29
COL6A1P12109 CYCSP52-201ENST00000422857 310 ntBASIC7.02□□□□□ -1.29
COL6A1P12109 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC7.02□□□□□ -1.29
COL6A1P12109 PCBP2P1-201ENST00000437262 977 ntBASIC7.02□□□□□ -1.29
COL6A1P12109 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC7.02□□□□□ -1.29
COL6A1P12109 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC7.02□□□□□ -1.29
COL6A1P12109 AC093166.2-201ENST00000455969 1017 ntBASIC7.02□□□□□ -1.29
COL6A1P12109 OR13C1P-201ENST00000457612 963 ntBASIC7.02□□□□□ -1.29
COL6A1P12109 AC021074.2-201ENST00000468434 172 ntBASIC7.02□□□□□ -1.29
COL6A1P12109 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC7.02□□□□□ -1.29
COL6A1P12109 RN7SL714P-201ENST00000487050 298 ntBASIC7.02□□□□□ -1.29
COL6A1P12109 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC7.02□□□□□ -1.29
COL6A1P12109 RPL23AP73-201ENST00000492507 471 ntBASIC7.02□□□□□ -1.29
COL6A1P12109 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC7.02□□□□□ -1.29
COL6A1P12109 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC7.02□□□□□ -1.29
COL6A1P12109 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC7.02□□□□□ -1.29
COL6A1P12109 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC7.02□□□□□ -1.29
COL6A1P12109 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC7.02□□□□□ -1.29
COL6A1P12109 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC7.02□□□□□ -1.29
COL6A1P12109 AC233702.7-202ENST00000582941 211 ntBASIC7.02□□□□□ -1.29
COL6A1P12109 MIR6809-201ENST00000612189 116 ntBASIC7.02□□□□□ -1.29
COL6A1P12109 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL6A1P12109 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
COL6A1P12109 AC245100.2-201ENST00000454544 1679 ntBASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms