Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
TOP2AP11388 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
TOP2AP11388 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
TOP2AP11388 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC9.62□□□□□ -0.87
TOP2AP11388 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
TOP2AP11388 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
TOP2AP11388 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
TOP2AP11388 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
TOP2AP11388 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
TOP2AP11388 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC9.62□□□□□ -0.87
TOP2AP11388 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
TOP2AP11388 RNU6ATAC21P-201ENST00000408656 126 ntBASIC9.61□□□□□ -0.87
TOP2AP11388 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC9.61□□□□□ -0.87
TOP2AP11388 CBX1P2-201ENST00000453841 458 ntBASIC9.61□□□□□ -0.87
TOP2AP11388 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC9.61□□□□□ -0.87
TOP2AP11388 SLC25A51P1-201ENST00000468432 871 ntBASIC9.61□□□□□ -0.87
TOP2AP11388 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC9.61□□□□□ -0.87
TOP2AP11388 AC011447.4-201ENST00000587562 111 ntBASIC9.61□□□□□ -0.87
TOP2AP11388 uc_338.18-201ENST00000615451 175 ntBASIC9.61□□□□□ -0.87
TOP2AP11388 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
TOP2AP11388 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC9.61□□□□□ -0.87
TOP2AP11388 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
TOP2AP11388 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
TOP2AP11388 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
TOP2AP11388 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC9.61□□□□□ -0.87
TOP2AP11388 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
TOP2AP11388 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC9.61□□□□□ -0.87
TOP2AP11388 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
TOP2AP11388 DPY19L2P2-203ENST00000435536 1858 ntBASIC9.61□□□□□ -0.87
TOP2AP11388 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
TOP2AP11388 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
TOP2AP11388 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC9.61□□□□□ -0.87
TOP2AP11388 AC093655.2-201ENST00000425735 631 ntBASIC9.61□□□□□ -0.87
TOP2AP11388 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC9.61□□□□□ -0.87
TOP2AP11388 TRY2P-201ENST00000448860 689 ntBASIC9.61□□□□□ -0.87
TOP2AP11388 AL451063.1-201ENST00000450164 1133 ntBASIC9.61□□□□□ -0.87
TOP2AP11388 MORF4L1P4-201ENST00000450245 976 ntBASIC9.61□□□□□ -0.87
TOP2AP11388 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC9.61□□□□□ -0.87
TOP2AP11388 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
TOP2AP11388 AC023818.1-201ENST00000498379 384 ntBASIC9.61□□□□□ -0.87
TOP2AP11388 AC137627.1-201ENST00000545761 289 ntBASIC9.61□□□□□ -0.87
TOP2AP11388 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC9.61□□□□□ -0.87
TOP2AP11388 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
TOP2AP11388 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
TOP2AP11388 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
TOP2AP11388 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC9.6□□□□□ -0.87
TOP2AP11388 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC9.6□□□□□ -0.87
TOP2AP11388 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC9.6□□□□□ -0.87
TOP2AP11388 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
TOP2AP11388 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
TOP2AP11388 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
TOP2AP11388 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC9.6□□□□□ -0.87
TOP2AP11388 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC9.6□□□□□ -0.87
TOP2AP11388 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
TOP2AP11388 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC9.6□□□□□ -0.87
TOP2AP11388 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC9.6□□□□□ -0.87
TOP2AP11388 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC9.6□□□□□ -0.87
TOP2AP11388 AC021106.1-201ENST00000509020 1058 ntBASIC9.6□□□□□ -0.87
TOP2AP11388 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC9.6□□□□□ -0.87
TOP2AP11388 AP002373.2-201ENST00000541631 1060 ntBASIC9.6□□□□□ -0.87
TOP2AP11388 CR383656.6-201ENST00000550518 394 ntBASIC9.6□□□□□ -0.87
TOP2AP11388 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC9.6□□□□□ -0.87
TOP2AP11388 MIR4330-201ENST00000579077 105 ntBASIC9.6□□□□□ -0.87
TOP2AP11388 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC9.6□□□□□ -0.87
TOP2AP11388 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC9.6□□□□□ -0.87
TOP2AP11388 AL627230.1-201ENST00000613077 211 ntBASIC9.6□□□□□ -0.87
TOP2AP11388 AL591926.8-201ENST00000616876 211 ntBASIC9.6□□□□□ -0.87
TOP2AP11388 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
TOP2AP11388 CASC19-281ENST00000642118 1554 ntBASIC9.6□□□□□ -0.87
TOP2AP11388 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC9.6□□□□□ -0.87
TOP2AP11388 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
TOP2AP11388 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
TOP2AP11388 AL359195.2-201ENST00000623657 4412 ntBASIC9.59□□□□□ -0.87
TOP2AP11388 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC9.59□□□□□ -0.87
TOP2AP11388 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
TOP2AP11388 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC9.59□□□□□ -0.87
TOP2AP11388 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC9.59□□□□□ -0.87
TOP2AP11388 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC9.59□□□□□ -0.87
TOP2AP11388 RPS29P22-201ENST00000472363 168 ntBASIC9.59□□□□□ -0.87
TOP2AP11388 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC9.59□□□□□ -0.87
TOP2AP11388 HIGD1AP5-201ENST00000529959 259 ntBASIC9.59□□□□□ -0.87
TOP2AP11388 OR5AM1P-201ENST00000532136 1032 ntBASIC9.59□□□□□ -0.87
TOP2AP11388 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC9.59□□□□□ -0.87
TOP2AP11388 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC9.59□□□□□ -0.87
TOP2AP11388 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC9.59□□□□□ -0.87
TOP2AP11388 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC9.59□□□□□ -0.87
TOP2AP11388 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
TOP2AP11388 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
TOP2AP11388 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
TOP2AP11388 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC9.58□□□□□ -0.88
TOP2AP11388 CRIP1P1-201ENST00000427567 185 ntBASIC9.58□□□□□ -0.88
TOP2AP11388 RPS11P7-201ENST00000442125 465 ntBASIC9.58□□□□□ -0.88
TOP2AP11388 AZGP1P2-201ENST00000454506 345 ntBASIC9.58□□□□□ -0.88
TOP2AP11388 Z92846.1-201ENST00000456203 268 ntBASIC9.58□□□□□ -0.88
TOP2AP11388 AC092324.1-201ENST00000468671 324 ntBASIC9.58□□□□□ -0.88
TOP2AP11388 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC9.58□□□□□ -0.88
TOP2AP11388 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC9.58□□□□□ -0.88
TOP2AP11388 SCARNA16.4-201ENST00000516956 187 ntBASIC9.58□□□□□ -0.88
TOP2AP11388 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
TOP2AP11388 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC9.58□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms