Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
VTNP04004 VDAC2P4-201ENST00000452925 711 ntBASIC6.24□□□□□ -1.41
VTNP04004 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.24□□□□□ -1.41
VTNP04004 AC100832.1-201ENST00000471945 383 ntBASIC6.24□□□□□ -1.41
VTNP04004 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.24□□□□□ -1.41
VTNP04004 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.24□□□□□ -1.41
VTNP04004 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC6.24□□□□□ -1.41
VTNP04004 BX510359.5-201ENST00000515651 304 ntBASIC6.24□□□□□ -1.41
VTNP04004 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.24□□□□□ -1.41
VTNP04004 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC6.24□□□□□ -1.41
VTNP04004 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.24□□□□□ -1.41
VTNP04004 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
VTNP04004 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.24□□□□□ -1.41
VTNP04004 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.24□□□□□ -1.41
VTNP04004 AC126615.2-201ENST00000553003 515 ntBASIC6.24□□□□□ -1.41
VTNP04004 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.24□□□□□ -1.41
VTNP04004 AC015720.2-201ENST00000567709 334 ntBASIC6.24□□□□□ -1.41
VTNP04004 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.24□□□□□ -1.41
VTNP04004 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.24□□□□□ -1.41
VTNP04004 AC013244.1-201ENST00000604279 193 ntBASIC6.24□□□□□ -1.41
VTNP04004 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.24□□□□□ -1.41
VTNP04004 AC005840.5-201ENST00000619166 599 ntBASIC6.24□□□□□ -1.41
VTNP04004 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.24□□□□□ -1.41
VTNP04004 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
VTNP04004 AC020656.2-201ENST00000613291 5309 ntBASIC6.24□□□□□ -1.41
VTNP04004 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VTNP04004 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VTNP04004 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.24□□□□□ -1.41
VTNP04004 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
VTNP04004 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
VTNP04004 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
VTNP04004 AC027279.1-201ENST00000568885 4284 ntBASIC6.24□□□□□ -1.41
VTNP04004 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
VTNP04004 PWAR1-201ENST00000624188 2414 ntBASIC6.23□□□□□ -1.41
VTNP04004 OR9K1P-201ENST00000326513 941 ntBASIC6.23□□□□□ -1.41
VTNP04004 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
VTNP04004 SNORD1C-201ENST00000363315 78 ntBASIC6.23□□□□□ -1.41
VTNP04004 RN7SKP28-201ENST00000364770 305 ntBASIC6.23□□□□□ -1.41
VTNP04004 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC6.23□□□□□ -1.41
VTNP04004 RNU6-171P-201ENST00000384354 107 ntBASIC6.23□□□□□ -1.41
VTNP04004 GAPDHP42-201ENST00000406848 981 ntBASIC6.23□□□□□ -1.41
VTNP04004 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.23□□□□□ -1.41
VTNP04004 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
VTNP04004 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
VTNP04004 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.23□□□□□ -1.41
VTNP04004 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.23□□□□□ -1.41
VTNP04004 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.23□□□□□ -1.41
VTNP04004 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.23□□□□□ -1.41
VTNP04004 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.23□□□□□ -1.41
VTNP04004 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.23□□□□□ -1.41
VTNP04004 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.23□□□□□ -1.41
VTNP04004 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC6.23□□□□□ -1.41
VTNP04004 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.23□□□□□ -1.41
VTNP04004 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.23□□□□□ -1.41
VTNP04004 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.23□□□□□ -1.41
VTNP04004 AL121594.2-201ENST00000541658 472 ntBASIC6.23□□□□□ -1.41
VTNP04004 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.23□□□□□ -1.41
VTNP04004 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.23□□□□□ -1.41
VTNP04004 PPATP2-201ENST00000605635 508 ntBASIC6.23□□□□□ -1.41
VTNP04004 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.23□□□□□ -1.41
VTNP04004 AC010245.2-201ENST00000606908 1167 ntBASIC6.23□□□□□ -1.41
VTNP04004 BX323046.1-201ENST00000610145 535 ntBASIC6.23□□□□□ -1.41
VTNP04004 SDR42E1P1-201ENST00000611327 477 ntBASIC6.23□□□□□ -1.41
VTNP04004 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
VTNP04004 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.23□□□□□ -1.41
VTNP04004 MIR8080-201ENST00000622224 89 ntBASIC6.23□□□□□ -1.41
VTNP04004 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.23□□□□□ -1.41
VTNP04004 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
VTNP04004 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
VTNP04004 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
VTNP04004 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
VTNP04004 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.23□□□□□ -1.41
VTNP04004 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.23□□□□□ -1.41
VTNP04004 AL591135.1-201ENST00000401578 5914 ntBASIC6.23□□□□□ -1.41
VTNP04004 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
VTNP04004 AC018809.2-201ENST00000602436 3823 ntBASIC6.23□□□□□ -1.41
VTNP04004 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
VTNP04004 AC011933.2-201ENST00000578539 2790 ntBASIC6.23□□□□□ -1.41
VTNP04004 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
VTNP04004 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.22□□□□□ -1.41
VTNP04004 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
VTNP04004 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
VTNP04004 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
VTNP04004 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.22□□□□□ -1.41
VTNP04004 LYPLA1P1-201ENST00000434514 622 ntBASIC6.22□□□□□ -1.41
VTNP04004 AC011225.1-201ENST00000457751 369 ntBASIC6.22□□□□□ -1.41
VTNP04004 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC6.22□□□□□ -1.41
VTNP04004 AC008638.1-201ENST00000506035 866 ntBASIC6.22□□□□□ -1.41
VTNP04004 IGLV3-24-201ENST00000517477 197 ntBASIC6.22□□□□□ -1.41
VTNP04004 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.22□□□□□ -1.41
VTNP04004 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
VTNP04004 AC016180.1-201ENST00000567945 403 ntBASIC6.22□□□□□ -1.41
VTNP04004 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
VTNP04004 MIR1269B-201ENST00000580405 75 ntBASIC6.22□□□□□ -1.41
VTNP04004 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.22□□□□□ -1.41
VTNP04004 FKBP1AP1-201ENST00000594588 318 ntBASIC6.22□□□□□ -1.41
VTNP04004 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
VTNP04004 SUGT1P3-202ENST00000604259 383 ntBASIC6.22□□□□□ -1.41
VTNP04004 SUMO2P15-201ENST00000604285 278 ntBASIC6.22□□□□□ -1.41
VTNP04004 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms