Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 ATP5LP5-201ENST00000483050 299 ntBASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 AC122718.2-201ENST00000505325 591 ntBASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 AC025458.1-201ENST00000506046 166 ntBASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 DUTP7-201ENST00000507982 486 ntBASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 OR4A17P-201ENST00000526032 904 ntBASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 PMS2P3-207ENST00000529061 717 ntBASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 AC068305.2-201ENST00000550567 1205 ntBASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 AC026826.3-201ENST00000561747 158 ntBASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 AL049840.6-201ENST00000604583 345 ntBASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 AL359091.2-201ENST00000609303 556 ntBASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 MIR6889-201ENST00000613185 59 ntBASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRAV27A0A087WT01 AC007842.1-201ENST00000597336 2039 ntBASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 GAPDHP24-201ENST00000328713 983 ntBASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 RNU1-150P-201ENST00000362491 162 ntBASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 RNA5SP30-201ENST00000365552 115 ntBASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 RPSAP35-201ENST00000413753 818 ntBASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 RNF10P1-201ENST00000418589 369 ntBASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 NENFP1-201ENST00000419476 466 ntBASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 RPS27AP6-201ENST00000427962 448 ntBASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 YRDCP3-201ENST00000456507 480 ntBASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 RPL9P15-201ENST00000491096 532 ntBASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 AC011853.1-201ENST00000518911 454 ntBASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 OR5AM1P-201ENST00000532136 1032 ntBASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 AC021766.1-201ENST00000624404 741 ntBASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 AL022311.1-201ENST00000623726 19416 ntBASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.07□□□□□ -1.6
TRAV27A0A087WT01 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRAV27A0A087WT01 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.06□□□□□ -1.6
TRAV27A0A087WT01 NLRP3P1-201ENST00000622303 1785 ntBASIC5.06□□□□□ -1.6
TRAV27A0A087WT01 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
TRAV27A0A087WT01 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRAV27A0A087WT01 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
TRAV27A0A087WT01 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.06□□□□□ -1.6
TRAV27A0A087WT01 AC006206.1-201ENST00000544842 3387 ntBASIC5.06□□□□□ -1.6
TRAV27A0A087WT01 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.06□□□□□ -1.6
TRAV27A0A087WT01 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRAV27A0A087WT01 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
TRAV27A0A087WT01 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.06□□□□□ -1.6
TRAV27A0A087WT01 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.06□□□□□ -1.6
TRAV27A0A087WT01 AC092681.1-201ENST00000297369 291 ntBASIC5.06□□□□□ -1.6
TRAV27A0A087WT01 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRAV27A0A087WT01 MIR1203-201ENST00000408812 85 ntBASIC5.06□□□□□ -1.6
TRAV27A0A087WT01 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms