Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 AC110602.1-201ENST00000437414 318 ntBASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 RN7SL197P-201ENST00000466981 299 ntBASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 ATP5LP5-201ENST00000483050 299 ntBASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 AL049840.6-201ENST00000604583 345 ntBASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 AL031658.2-201ENST00000616850 651 ntBASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 AC073593.1-201ENST00000624500 411 ntBASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
VPS29Q9UBQ0 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 RNU1-150P-201ENST00000362491 162 ntBASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 RNA5SP326-201ENST00000363209 110 ntBASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 RN7SKP186-201ENST00000365371 303 ntBASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 RPL6P21-201ENST00000418672 846 ntBASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 OR5W1P-201ENST00000423705 938 ntBASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 PCBP2P1-201ENST00000437262 977 ntBASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 AL359839.1-201ENST00000451975 1160 ntBASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 NXT1P1-201ENST00000458481 316 ntBASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 ACA64.1-201ENST00000459171 127 ntBASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 RPS17P5-201ENST00000498293 408 ntBASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 AC125494.2-201ENST00000602431 657 ntBASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 OR8G3P-202ENST00000641572 1255 ntBASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 AL161912.4-201ENST00000623889 2468 ntBASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VPS29Q9UBQ0 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
VPS29Q9UBQ0 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VPS29Q9UBQ0 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.42□□□□□ -1.54
VPS29Q9UBQ0 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.42□□□□□ -1.54
VPS29Q9UBQ0 IFIT1P1-201ENST00000400497 1449 ntBASIC5.42□□□□□ -1.54
VPS29Q9UBQ0 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.42□□□□□ -1.54
VPS29Q9UBQ0 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.42□□□□□ -1.54
VPS29Q9UBQ0 AC123769.1-201ENST00000530992 3192 ntBASIC5.42□□□□□ -1.54
VPS29Q9UBQ0 CASC19-260ENST00000641828 2001 ntBASIC5.42□□□□□ -1.54
VPS29Q9UBQ0 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
VPS29Q9UBQ0 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
VPS29Q9UBQ0 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms