Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PPARGC1AQ9UBK2 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 AC116158.1-201ENST00000560231 2129 ntBASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 OR5H2-201ENST00000355273 945 ntBASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 SNORD56.4-201ENST00000363883 71 ntBASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 Z68868.1-201ENST00000429048 544 ntBASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 Z95152.1-201ENST00000453556 656 ntBASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 CEACAMP11-201ENST00000455211 583 ntBASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 RN7SL393P-201ENST00000463588 296 ntBASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 AC010486.2-201ENST00000505572 483 ntBASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 RFESD-208ENST00000513950 464 ntTSL 5 BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 ZNF321P-202ENST00000550843 495 ntBASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 AC026956.1-201ENST00000558741 396 ntBASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 SNORD96A-201ENST00000606577 79 ntBASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 AL359715.4-201ENST00000606629 1436 ntBASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 MIR6885-201ENST00000612241 66 ntBASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 RMST_5.1-201ENST00000618704 126 ntBASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 CASC19-274ENST00000642018 970 ntBASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 AC025809.2-201ENST00000625085 1802 ntBASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
PPARGC1AQ9UBK2 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PPARGC1AQ9UBK2 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
PPARGC1AQ9UBK2 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.79□□□□□ -1.32
PPARGC1AQ9UBK2 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PPARGC1AQ9UBK2 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.79□□□□□ -1.32
PPARGC1AQ9UBK2 AC009120.2-204ENST00000621548 2032 ntBASIC6.79□□□□□ -1.32
PPARGC1AQ9UBK2 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC6.79□□□□□ -1.32
PPARGC1AQ9UBK2 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
PPARGC1AQ9UBK2 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
PPARGC1AQ9UBK2 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PPARGC1AQ9UBK2 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PPARGC1AQ9UBK2 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
PPARGC1AQ9UBK2 RNU6-236P-201ENST00000363886 106 ntBASIC6.79□□□□□ -1.32
PPARGC1AQ9UBK2 RNU4-68P-201ENST00000364314 141 ntBASIC6.79□□□□□ -1.32
PPARGC1AQ9UBK2 U3.52-201ENST00000384034 216 ntBASIC6.79□□□□□ -1.32
PPARGC1AQ9UBK2 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.79□□□□□ -1.32
PPARGC1AQ9UBK2 RN7SKP188-201ENST00000410789 317 ntBASIC6.79□□□□□ -1.32
PPARGC1AQ9UBK2 RANP6-201ENST00000413691 644 ntBASIC6.79□□□□□ -1.32
PPARGC1AQ9UBK2 AL445183.3-201ENST00000414168 502 ntBASIC6.79□□□□□ -1.32
PPARGC1AQ9UBK2 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC6.79□□□□□ -1.32
PPARGC1AQ9UBK2 AC009518.2-201ENST00000418056 731 ntBASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms