Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC073869.7-201ENST00000640874 297 ntBASIC5.9□□□□□ -1.46
LRFN1Q9P244 AC062022.1-201ENST00000451026 1684 ntBASIC5.9□□□□□ -1.47
LRFN1Q9P244 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC5.9□□□□□ -1.47
LRFN1Q9P244 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
LRFN1Q9P244 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
LRFN1Q9P244 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
LRFN1Q9P244 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
LRFN1Q9P244 AKAP17BP-201ENST00000431706 2719 ntBASIC5.9□□□□□ -1.47
LRFN1Q9P244 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.89□□□□□ -1.47
LRFN1Q9P244 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LRFN1Q9P244 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
LRFN1Q9P244 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
LRFN1Q9P244 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC5.89□□□□□ -1.47
LRFN1Q9P244 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC5.89□□□□□ -1.47
LRFN1Q9P244 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LRFN1Q9P244 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
LRFN1Q9P244 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
LRFN1Q9P244 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LRFN1Q9P244 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.89□□□□□ -1.47
LRFN1Q9P244 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.89□□□□□ -1.47
LRFN1Q9P244 AL034374.1-201ENST00000406329 351 ntBASIC5.89□□□□□ -1.47
LRFN1Q9P244 AL139805.1-201ENST00000407837 289 ntBASIC5.89□□□□□ -1.47
LRFN1Q9P244 AL157884.1-201ENST00000424561 454 ntBASIC5.89□□□□□ -1.47
LRFN1Q9P244 AL139415.1-201ENST00000424862 352 ntBASIC5.89□□□□□ -1.47
LRFN1Q9P244 AC092865.3-201ENST00000425390 1026 ntBASIC5.89□□□□□ -1.47
LRFN1Q9P244 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.89□□□□□ -1.47
LRFN1Q9P244 AL590399.4-201ENST00000436561 601 ntBASIC5.89□□□□□ -1.47
LRFN1Q9P244 AL645936.1-201ENST00000441979 518 ntBASIC5.89□□□□□ -1.47
LRFN1Q9P244 HMGN1P2-201ENST00000445197 310 ntBASIC5.89□□□□□ -1.47
LRFN1Q9P244 AL096829.2-201ENST00000446582 742 ntBASIC5.89□□□□□ -1.47
LRFN1Q9P244 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.89□□□□□ -1.47
LRFN1Q9P244 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.89□□□□□ -1.47
LRFN1Q9P244 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LRFN1Q9P244 FCF1P6-201ENST00000456841 595 ntBASIC5.89□□□□□ -1.47
LRFN1Q9P244 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.89□□□□□ -1.47
LRFN1Q9P244 ATP5G1P3-201ENST00000463301 410 ntBASIC5.89□□□□□ -1.47
LRFN1Q9P244 AC008379.1-201ENST00000463655 464 ntBASIC5.89□□□□□ -1.47
LRFN1Q9P244 CYCSP20-201ENST00000473154 315 ntBASIC5.89□□□□□ -1.47
LRFN1Q9P244 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.89□□□□□ -1.47
LRFN1Q9P244 AP002453.1-201ENST00000492327 668 ntBASIC5.89□□□□□ -1.47
LRFN1Q9P244 FTH1P8-201ENST00000498161 514 ntBASIC5.89□□□□□ -1.47
LRFN1Q9P244 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC5.89□□□□□ -1.47
LRFN1Q9P244 CAB39P1-201ENST00000502277 460 ntBASIC5.89□□□□□ -1.47
LRFN1Q9P244 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC5.89□□□□□ -1.47
LRFN1Q9P244 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.89□□□□□ -1.47
LRFN1Q9P244 AC091965.3-201ENST00000506236 208 ntBASIC5.89□□□□□ -1.47
LRFN1Q9P244 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
LRFN1Q9P244 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.89□□□□□ -1.47
LRFN1Q9P244 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
LRFN1Q9P244 AC090568.1-201ENST00000509499 856 ntBASIC5.89□□□□□ -1.47
LRFN1Q9P244 RN7SKP141-201ENST00000516167 338 ntBASIC5.89□□□□□ -1.47
LRFN1Q9P244 AP003355.1-201ENST00000518956 587 ntBASIC5.89□□□□□ -1.47
LRFN1Q9P244 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
LRFN1Q9P244 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.89□□□□□ -1.47
LRFN1Q9P244 HIGD1AP18-201ENST00000520730 278 ntBASIC5.89□□□□□ -1.47
LRFN1Q9P244 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC5.89□□□□□ -1.47
LRFN1Q9P244 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LRFN1Q9P244 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.89□□□□□ -1.47
LRFN1Q9P244 AC006512.2-201ENST00000543250 486 ntBASIC5.89□□□□□ -1.47
LRFN1Q9P244 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.89□□□□□ -1.47
LRFN1Q9P244 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.89□□□□□ -1.47
LRFN1Q9P244 AC002519.2-203ENST00000567043 837 ntBASIC5.89□□□□□ -1.47
LRFN1Q9P244 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC5.89□□□□□ -1.47
LRFN1Q9P244 RN7SL753P-201ENST00000581238 290 ntBASIC5.89□□□□□ -1.47
LRFN1Q9P244 AC124283.4-201ENST00000581815 456 ntBASIC5.89□□□□□ -1.47
LRFN1Q9P244 AC015818.6-201ENST00000584274 634 ntBASIC5.89□□□□□ -1.47
LRFN1Q9P244 AP003117.1-201ENST00000602771 554 ntBASIC5.89□□□□□ -1.47
LRFN1Q9P244 AL953862.2-201ENST00000603089 820 ntBASIC5.89□□□□□ -1.47
LRFN1Q9P244 AC011458.1-201ENST00000604034 617 ntBASIC5.89□□□□□ -1.47
LRFN1Q9P244 RPSAP75-201ENST00000605848 301 ntBASIC5.89□□□□□ -1.47
LRFN1Q9P244 AL391834.2-201ENST00000609982 546 ntBASIC5.89□□□□□ -1.47
LRFN1Q9P244 BX323046.1-201ENST00000610145 535 ntBASIC5.89□□□□□ -1.47
LRFN1Q9P244 AC008759.3-201ENST00000613300 508 ntBASIC5.89□□□□□ -1.47
LRFN1Q9P244 AC022919.1-201ENST00000624979 626 ntBASIC5.89□□□□□ -1.47
LRFN1Q9P244 AC119674.1-212ENST00000641155 993 ntBASIC5.89□□□□□ -1.47
LRFN1Q9P244 AC009779.8-201ENST00000641684 4384 ntBASIC5.89□□□□□ -1.47
LRFN1Q9P244 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC5.89□□□□□ -1.47
LRFN1Q9P244 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LRFN1Q9P244 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.89□□□□□ -1.47
LRFN1Q9P244 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LRFN1Q9P244 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LRFN1Q9P244 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LRFN1Q9P244 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LRFN1Q9P244 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LRFN1Q9P244 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LRFN1Q9P244 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
LRFN1Q9P244 AL161912.4-201ENST00000623889 2468 ntBASIC5.88□□□□□ -1.47
LRFN1Q9P244 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LRFN1Q9P244 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
LRFN1Q9P244 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.88□□□□□ -1.47
LRFN1Q9P244 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LRFN1Q9P244 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
LRFN1Q9P244 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LRFN1Q9P244 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LRFN1Q9P244 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
LRFN1Q9P244 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LRFN1Q9P244 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LRFN1Q9P244 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LRFN1Q9P244 RNA5SP514-201ENST00000363717 111 ntBASIC5.88□□□□□ -1.47
LRFN1Q9P244 AC005522.1-201ENST00000395416 346 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms