Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
AMBRA1Q9C0C7 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 RNA5SP478-201ENST00000364657 115 ntBASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 AL121835.1-201ENST00000404250 354 ntBASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 ZNF602P-201ENST00000405929 924 ntBASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 AL592310.1-201ENST00000414330 671 ntBASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 UBE2V1P14-201ENST00000415815 558 ntBASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 CDC42P6-201ENST00000421246 576 ntBASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 AC092447.2-201ENST00000435487 669 ntBASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 MTCYBP31-201ENST00000438855 1122 ntBASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 OR13K1P-201ENST00000444577 975 ntBASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 AL627224.1-201ENST00000448334 444 ntBASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 RPL23AP23-201ENST00000452590 471 ntBASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 RPS27AP3-201ENST00000453803 454 ntBASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 AC099670.1-201ENST00000455141 783 ntBASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 snoU13.29-201ENST00000459370 104 ntBASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 AC009567.2-201ENST00000502989 349 ntBASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 AC131392.1-201ENST00000506490 633 ntBASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 AC112673.1-201ENST00000513168 575 ntBASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 RN7SKP196-201ENST00000516267 345 ntBASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 PPIAP14-201ENST00000577627 496 ntBASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 AP000919.1-202ENST00000581139 1264 ntBASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 AC012213.4-201ENST00000606457 354 ntBASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 AC079395.3-201ENST00000615161 484 ntBASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 AL133370.2-201ENST00000619934 439 ntBASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 AC027559.1-201ENST00000636288 271 ntBASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 AC092692.1-201ENST00000623625 2595 ntBASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
AMBRA1Q9C0C7 AL359976.1-201ENST00000418655 3528 ntBASIC5.92□□□□□ -1.46
AMBRA1Q9C0C7 AC015799.1-201ENST00000622996 3122 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms